Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2183 ATGGATAATGATGATAGGGAAGAGTCGAGAATTAGGATAGAGGAGAATATGGAGGAGACGGGATATGAAGACAATGATGATGAGAAAGGGAGGCTAAGGGAGCCACTTCTTGTGAATAAAAACAGGGCCAACAATGGTTCTCAGATTGCCATTGTTGGAGCTAATGCCTGTTCTATTGAAAGTCTCGATTACGAGATTATTGAGAGTGATCTTTATATGCAAGATTTGAGGTCTAGAACAAAGGTCGAGAAGTTCCGTTACCTTGCCCTAAAATGGACTCTTGCACTTCTTGTTGGTTTAAGCACAGGCCTTGTTGCCTTTTTTAATAATATGGCAACTGAGAATATTACTGGTACCAAGCTTCTACTTGCCGAGAATCTCATGCTCAACAACAAGTTTTTTCAGGCCTTTGCAGTGTATGGTGGTAGTAATTTGATTTTGGCAATTGCTGCAGCAGCACTATGTGCTTATATTGCTCCTGCAGCAGCAGGGTCAGGCATACCTGAGGTGAAGGCATACCTCAATGGGGTAGATTCTCATTCTATACTGGCTCCAGCTACCCTCTTTGTAAAGATTTTTGGTTCAATTTTTGGGGTGGCTGCGGGATTTGTGGTGGGTAAGGAAGGACCTATGGTACATACTGGCTCTTGCATTGCCAATATACTTGGACAGGGTGGTTCAAAAAAATATGGCCTAGACTGCAAATTGCTTAGATATATTAAAAATGATCGAGACCGGAGGGATTTGATCACATGCGGCGCAGCCGCCGGGGTCGCCGGTGCTTTCCGTGCCCCTCTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGAAGTGCACTTCTGTGGCGGACTTTTTTTACAACAGCAGTAGTGGCAGTAGTGCTGAGAGGCTTCATGCAGTTATGCCGAGGTGGAAAATGTGGTCTTTTTGGGGAAGGAGGCTTGATTATGTTTGATGTTAGCTCACAAGAGCCTCTATACGGAATCCCTGACTTTCTGTTACTCATATTTATTGGAGTCATCGGAGGAATTTTGGGAAGCCTTTACAATTATCTCGTCCTCAAAGTCCTCCGCACTTATAGTGTCATCAATGAGAGAGGCCCCAAAGTCAAAATTGTACTTGTCATCATCATCAACCTCTTAACCTCTTGTGTCTCATTCGGCGTTCCATGGCTATCTCAATGTCTCCCTTGTCCTCCAAACTTAGGGGACAAGTGCCCCACCGTAGGACGTTCTGGAAACTACAAAAGTTTCCAATGCCCACCAAACCATTACAACGATCTTGCCTCTCTGTTTTTCTCTCCCAATGATGACACTATCCGCAACCTATTAACACCAATGTCCAGCAAAGAGTTTCAAATCTCTACACTTTCAGCTTTCTTTGTGGTCATATACTTCCTTGGAATCATCACCTACGGCATCGCCATTCCCTCCGGCCTCTTCATCCCCGTCATCCTCGCCGGAGCCTCCTACGGCCGCCTCGCTTCTCGCCTTTTAAGCTCCTTCACCATCCTTGATCCCGGCATGTTTGCACTTATCGGAGCTGCATCTTTCCTTGGTGGTACAATGAGAATGACAGTTTCTATATGTGTCATACTTCTTGAGCTCACTAATAACCTCTACATACTCCCTCTAGTTATGATGGTTCAACTCATATCAAAGACTGTGGCTGATATTTTTAACCAAGGTATTTATGATCAGATAGTGAAATTAAAGGGCCTGCCTTATCTAGAAGCTGTAGCCGAACCGTACATGAGGCATTTAACAGCCGGAGATGTTGTTTCCGGGCCGTTGTTCACGTTTTCTGGGGTTGAGAAAGTGAGGAATATTGTTCATGCTTTGAGGGTAACACAACATCATGGTTTTCCGGTGATTAATGAGCCTCCATTCTCAGAAGCTTCTGAGTTATGTGGGCTAGTGTTTAGGTCTCATTTGCTTGTGCTTCTGAAACAGAGGAAGTTTACAAAGCAAAAGGTGATGACTGGATCTACAATTATGAGGAACTTTGAGGCACATGATTTTGCAAAGCCTGGTTTAGGTAAGGGAATTAAGCTACATGATATTCATATTGGTGAGGAGGAGATGGAAATGTACGTTGATCTTCATCCAGTTACAAACACTTCACCTTACACTGTGGTGGAAACTATGTCTCTTGCAAAAGCTGCTCTTCTTTTCAGAGAACTTGGTCTTAGGCACCTGTTGGTGGTTCCAAAGACAACAGGAAGGCTTCCAGTTGTTGGGATATTGACAAGGCATGATTTTATGGCAGAGCATGTTTTGGGACTCTACCCTCACTTGGACCCTCACAGGGATTCAAGCGACTTATGA 2340 0.4432 MDNDDREESRIRIEENMEETGYEDNDDEKGRLREPLLVNKNRANNGSQIAIVGANACSIESLDYEIIESDLYMQDLRSRTKVEKFRYLALKWTLALLVGLSTGLVAFFNNMATENITGTKLLLAENLMLNNKFFQAFAVYGGSNLILAIAAAALCAYIAPAAAGSGIPEVKAYLNGVDSHSILAPATLFVKIFGSIFGVAAGFVVGKEGPMVHTGSCIANILGQGGSKKYGLDCKLLRYIKNDRDRRDLITCGAAAGVAGAFRAPLGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMQLCRGGKCGLFGEGGLIMFDVSSQEPLYGIPDFLLLIFIGVIGGILGSLYNYLVLKVLRTYSVINERGPKVKIVLVIIINLLTSCVSFGVPWLSQCLPCPPNLGDKCPTVGRSGNYKSFQCPPNHYNDLASLFFSPNDDTIRNLLTPMSSKEFQISTLSAFFVVIYFLGIITYGIAIPSGLFIPVILAGASYGRLASRLLSSFTILDPGMFALIGAASFLGGTMRMTVSICVILLELTNNLYILPLVMMVQLISKTVADIFNQGIYDQIVKLKGLPYLEAVAEPYMRHLTAGDVVSGPLFTFSGVEKVRNIVHALRVTQHHGFPVINEPPFSEASELCGLVFRSHLLVLLKQRKFTKQKVMTGSTIMRNFEAHDFAKPGLGKGIKLHDIHIGEEEMEMYVDLHPVTNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKTTGRLPVVGILTRHDFMAEHVLGLYPHLDPHRDSSDL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2183 779 CDD ClC_6_like 60 581 - -
Alju04g2183 779 Pfam CBS domain 710 759 IPR000644 -
Alju04g2183 779 FunFam Chloride channel ClC3 83 398 - -
Alju04g2183 779 SUPERFAMILY CBS-domain pair 586 760 IPR046342 -
Alju04g2183 779 Gene3D Clc chloride channel 83 581 - -
Alju04g2183 779 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 19 764 - -
Alju04g2183 779 SMART cbs_1 712 763 IPR000644 -
Alju04g2183 779 SMART cbs_1 601 654 IPR000644 -
Alju04g2183 779 PRINTS Chloride channel signature 480 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 530 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 512 528 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 568 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju04g2183 779 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju04g2183 779 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju04g2183 779 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju04g2183 779 PRINTS Plant CLC chloride channel signature 432 448 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju04g2183 779 CDD CBS_pair_voltage-gated_CLC_euk_bac 593 761 - -
Alju04g2183 779 ProSiteProfiles CBS domain profile. 709 772 IPR000644 -
Alju04g2183 779 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju04g2183 779 Gene3D - 582 765 IPR046342 -
Alju04g2183 779 MobiDBLite consensus disorder prediction 1 30 - -
Alju04g2183 779 SUPERFAMILY Clc chloride channel 70 583 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2183 Alju-ChrAlju04 53469305 53476641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2183 4 772 Ion Channels AT5G49890 70.694 0.0 1081