Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2177 ATGTTGGTAGTTTATGATGATCCCTCGGACCAACGATCACTGACTTTGGATGATACAAGCAGCACGGAGGAATCACCAGATGAAACCAGGCTCTCGTTGGAGACTGCTAATGATTCAATTCCATATATTGGGCAAAGGTTTTGCACTCATGATGCTGCATATGAATTTTATAGTGAATTTGCCAAGCGGTGTGGGTTCTCAATTCGACGACACCGTACAGAGGGAAAAGATGGCGTTGGAAAAGGACTGACCAGACGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTCAAAACATCAAATGAAAGTAAACCCCAAAGAAATCGAAAATCTTCCCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAAACAATGGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGATCTTTTGGAACCAAATCAAGTTCGATTTCTTCCTGCATACAGAACCATTTCAGATTCAGACAAAAGCCGAATCCTGATGTATGCTAAAACTGGGATTTCTGTCCATCAAATGATGCGGCTTTTGGAGCTCGAGAAGTGTGTGGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAACTTACTTCAATCATTTAGGAAATTAGAACCAGAAGAGGAAAGCATAGATTTACTAAGAATGTGCAGAAATATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTTCACACTTGATTCAAACAACTGTTTGGAGAATATAGCCTGGTCATATGCCTCATCAATACAGTCATATGATATCTTTGGTGATGCAGTGGTATTTGATACAACACATCGCCTGACTGCATTTGACATGCCATTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACATACGGTCATATTCCTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAGGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTCAAAGAAGCATTAGCTATTGAAATGCCAGCAACTAAACATGCTCTCTGCATATGGATGATTGTAGCTAAATTTCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAATGGAAGGCTGAATTTTATAGACTTTACAATCTTGAGTCAATTGAGGATTTTGAACTAGGTTGGAGGGATATGGTCAGTTCTTTTGGGCTGCATGCCAGCAGGCACATTGCTAATTTATATACTTTACGTTCACTTTGGGCATTGCCTTTTCTGAGAAGTCGTTTTTTTGCTGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAGCGATTTCTGAGCGCGCAGACCCGGCTTGCACACTTTGTGGAGCAGGTAGCCGTTGCTGTGGATTTCAAAGATCAAACTGGAGAACAGCAAACTATGCAACAGAATCTTCAAAATATTTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCCACAATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAACAACTTGTATTGGCTGCTCATTATGCATCTTTTCCATTGGAAGATAGCTTCCTTGTGAGGCACCATACAAAAGCCGAGGGAGGTCGGAGAGTGTATTGGTGTCCTCAGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGTCGGCATGCTCTTAGAGTTCTTTCAACCGGAAACTGCTTTCAGATCCCAGATAGATATCTTCCCTCTCGTTGGCGTCGAATCAGCATGACTTCTGCCAAGCTTCCTCAGAATGCACCTAAGGATCATGCTGAAAGAGTGCAGTTATTGCAAAACATGGTTTCTGCTCTTGTCACAGAATCTTCCAAGTCAAAGGAAAGATTGGATATTGCCACAGAGCAAGTTTCCCTCCTTCTATCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTTAGAGATATTCCTGGCATTGGTAGGAATCTTTGA 2019 0.4175 MLVVYDDPSDQRSLTLDDTSSTEESPDETRLSLETANDSIPYIGQRFCTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSNESKPQRNRKSSRCGCQAYMRISKTMELGTPEWRVTGFANHHNHDLLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLLELEKCVEPGYLPFTEKDVRNLLQSFRKLEPEEESIDLLRMCRNIKEKDPNFKFEFTLDSNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENIRSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALAIEMPATKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESIEDFELGWRDMVSSFGLHASRHIANLYTLRSLWALPFLRSRFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPLEDSFLVRHHTKAEGGRRVYWCPQEGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSAKLPQNAPKDHAERVQLLQNMVSALVTESSKSKERLDIATEQVSLLLSRIREQPVSLQGVRDIPGIGRNL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2177 672 SMART 26again6 557 584 IPR006564 GO:0008270
Alju04g2177 672 MobiDBLite consensus disorder prediction 1 31 - -
Alju04g2177 672 ProSiteProfiles Zinc finger SWIM-type profile. 534 582 IPR007527 GO:0008270
Alju04g2177 672 Pfam MULE transposase domain 271 363 IPR018289 -
Alju04g2177 672 Pfam FAR1 DNA-binding domain 55 148 IPR004330 -
Alju04g2177 672 Pfam SWIM zinc finger 553 580 IPR007527 GO:0008270
Alju04g2177 672 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 646 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2177 Alju-ChrAlju04 53399940 53402970 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju04g2177 MULE 2.5e-18 CL0219