Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2174 ATGGGAAAATCCCCTTACTACGATGACAATGGCCTCAAGAAAGGATCATGGACTCCTGAGGAAGATCTGAAGCTTATTCAGTGCATTCAGAAACATGGCCATGGAAGTTGGAGATCAATTCCCAAGATAGCTGGTCTGAATAGATCTGGAAAAAGCTGTAGGCTAAGGTGGACTAATTATTTAAGGCCTGACATCAAAAGAGGCAAGTTTTCTCAAGAAGAAGAGCAAACCATACTGCATCTCCATTCCATCCTTGGAAACAAATGGTCAGCAATTGCATCCCGTCTTCCGGGGAGGACAGATAATGAGATCAAGAATTTCTGGAACACACAGCTAAAGAAGAAGTTAATTCCATCGATTGGATGGACATCTACATACGAGATGAGAGAAAGTTTGCTGCTGCAATTGAGCCGGATAAGAGATTTTATCAGGCTGTTGTTGAGTTATCCCATGAGAACCGTTCATGATGGCGAACTCAAGACTTGGATTCACGAAGCTTCTTCAAATAGGATAAATTCTCTGGATGATTTGAATCGCCTTCTTAGTCAGAAGCCCCTTAATTGCTTCCAAGGCCTTTTACCAATGTACATATTGGAGAATGTGAAAAGAGGTTGTTGGAGTCCAAAATATGCTGATTCCAGCGGGATACCACAAGTCATTCTCAGCTTAGCTGCAAACCTTGCTGTGGATCAACTGATTCAAACTTTGATGTTTGAGGATGATCATGTACGCAATATTCACCATGTCTTGTTATCTACTAAAGATACAGTTGAAAAAAGACTAGTTAAGGAAAAAATAGAATTAGTCTTGAAAGATAAGGAAATTATGCTTAGCCTTCATGAAACCTTCACCCAAGTCTTACTTATTGATGCCTCAAATTCCCAAGGTCTGCCTGCAGAGGTCTATGTTCAGCATCAGATAGCTCAACAACTTCATCTTCCAATAATTCAAGGCAATGGCCATTTGCTTATAACAAGTATTAAAAAAGAGATGTCCGGAAAAAAATACTTGGTGCTTTTGGTGGATGGAGAAGCCAAAGAGCCTCTTGATCCTCGCAAAGTCGGTATTCCTGAAGAACTTGCAGGAGTTGTGGTGTGCATTACTTCGAAGCAGGCTAATAGTGAATTAACAATGGCAATGGATCTGAATATCAGCACAAAGGATCACTTGTTGCCATGGGAAGTTTTTTGTGCAAATATTGGCCTTGCAATTTTGCAATCAGAGTATACTAAGACAATGGCCGCACGTATAGTGAAAGAATGTGGTGGTCATCTACTTGCAGGAGCCATTGTAGCAAAATCTTTAATTAATGCAAAACATGAAGATTGGGAACGTGCTCTGTACAAATTGCGTTCGCTTCATTCTTCCTATGATAGTGATATGTTTCAGGGCCAGAGCAGTGTCTTGCTTAAAGCATTCATAAACTTCATCTGGCATGATTTAAGTAAGACACAAAAGTATTGTCTTACATCATGTTTATTCATTCCTAAATTTGGGAAGCTTGAAAATGAGTTGATCAATGATTGGATTTCTTCTCGATTGGTGGTTGCTAGTGAAGCAAAGCATAATTTGAGAGAGCTTGTGGACCGTGTTGCCTTGTTGCAATTAGAGGACTCCAAGTCAAGGTATATTCAAATTCCACAAGACACATATGCTATCTTGCAATTATTAAACACTCAAAAGCCTTTGTTCATGAAAAATTCTGAGTTAGGGTTGGTTGAAGCACCAAATAGTGAGCTGTGGCATAGTGCTATACATATTGATTTAGCAGACAATAAGCTATCTGAGCTACCTTCATCCCCAGATTGTCATGAACTCAAAGTGTTAAAGTTGCACAACAACATTGACCTGATGAAAATCCCACCCCTTTTCTTCTTCAAAATGCCTCTACTTTGCGTCTTTGATTTATCATACACTAGCGTTAGACAATTACCAAACTCCTTTTTTGAGTTGGAGCATCTTAGAGAACTCTATATGAAATCTTGTGAATGCTTCATGACACTGTCCTCAGAGGTTGGAAAATTGAAGAATCTAGAGAAGATTGATCTTGACAAGACTCATATTACACATATGCCAAAAGAGATCCAGGAGTTGACCAATCTCCAAAGTTTGACTCTTTGTTTGTTTGAGTATCGCAGCAGGAAAAGTAAAGAATATACGAGTTCAACAATTATTCCTTCCGGTGTGATTTCAAAGCTTAAGGGCCTAAAACATTTAAGCATTGATGTAAACCCTGATGATGAGCGATGGGAAGAAAATTTACAAGTCATTCTACCAGAAGTCTCAGTATTAGAATGCCTGCAAACTATTAGTTTGTACATTCCAGCACCTAAACTTTTAAATCTCATACCTCCACGCATTTTTGAGCTTGATTTTAGATTCACTGTTGGCAAACATATGTCACGGATCATTTCAGGTGCGCTACCCACAGCTGAAGAAAAATTTAAACAAAGTGAGAGAAGCTTAAAGTTTGTGAAAGGTTTTGATGTCCCCTATGAAGTAAGCTTTGCTGTTATACATAGCAAAGCTTTATTTTTAGATCGACATATGACAATCAAGGATCTCTCAAAATTTGGCATGAAAAGTATAGAGCAATTACAGGTGTGTGTATTGGCTGAATGTAAGGAGATGCAAACAATTGTTGATGGAAGATGCTCAGGTAGTAAGGATATACTTCCCCGTTTGCTAGTGTTGAGTGTATCATACATGAAGAATCTAAGAAGTATTTGTGAAGGAGTTCATTCTAGTCACAGTTTTGGCATGTTGAAGACCTTAACATTGCACAATTGTCCTATGCTAACAACTGTTTTCACCTTGGATTTTCTGGGCAACCTCTCACTTTTGAAGGTGCTTGTAGTTAAAGATTGTCCAAAAGTAAGAGCTTTAATATCTTGTGGACCATCCACACCTAGAGCAGGTACTTTCCTCCCAAAATTAAGAACAATGACACTTGTCCATCTTCCTGAACTGATCAGCATTTCAAATGGATTACACACGGGTCCATGTTTAGAAAACATAGGAATTTATGATTGCCCAAAACTTGAGAGGCTTTCAAAAACGGAACTGTCAAGTCAAAATTTGAAAGTCATCAAAGGAGATATCAAGTGGTGGGAGGCATTGACTTGGAGTGAAGCAGAATGGGGAATAGTTGGCCAACCATCTATTTTTGATTCCATCTTTTCTCCAATTGATAAACAGGCTGACATCATGAGTCAATTGACGTTGGATGATGATACTGATGACAGTGCAGGGGGGATAGTGGGTGAGCCATTGCAGTTTTCCAGTGTAACAAATTCCTCCATGAACAATCAGGTCGACTTAAGGACTCAATCTGGGGTAGATCATGATATTAACTATGATCCAGCGCATCCTTCTCATATGATGATGATCATGGATCTAATTGCTAATGGAAGCAACAGGAGTAGCAACGCTAGCACACAAGCCTCCTGTGTGGCAAATCCTGCTACTGTTTACAGTATAAATCAGAAGGGCAAGTCAGCATCCAATTCAGATCCTGAGCGATTTTCTGCTTTGGACTTTTGGTTTGAACCTTCAGCCAATGAAACTCAGGACTACAATGTTGACACAAATGAACTGGCTTTTTCTAGTCATCCAGCAATTTACAGTTCTAAATCTGACCAATTTGACAACTCCCTTCTTGACGAGACCTACTGTTGA 3678 0.3926 MGKSPYYDDNGLKKGSWTPEEDLKLIQCIQKHGHGSWRSIPKIAGLNRSGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASRLPGRTDNEIKNFWNTQLKKKLIPSIGWTSTYEMRESLLLQLSRIRDFIRLLLSYPMRTVHDGELKTWIHEASSNRINSLDDLNRLLSQKPLNCFQGLLPMYILENVKRGCWSPKYADSSGIPQVILSLAANLAVDQLIQTLMFEDDHVRNIHHVLLSTKDTVEKRLVKEKIELVLKDKEIMLSLHETFTQVLLIDASNSQGLPAEVYVQHQIAQQLHLPIIQGNGHLLITSIKKEMSGKKYLVLLVDGEAKEPLDPRKVGIPEELAGVVVCITSKQANSELTMAMDLNISTKDHLLPWEVFCANIGLAILQSEYTKTMAARIVKECGGHLLAGAIVAKSLINAKHEDWERALYKLRSLHSSYDSDMFQGQSSVLLKAFINFIWHDLSKTQKYCLTSCLFIPKFGKLENELINDWISSRLVVASEAKHNLRELVDRVALLQLEDSKSRYIQIPQDTYAILQLLNTQKPLFMKNSELGLVEAPNSELWHSAIHIDLADNKLSELPSSPDCHELKVLKLHNNIDLMKIPPLFFFKMPLLCVFDLSYTSVRQLPNSFFELEHLRELYMKSCECFMTLSSEVGKLKNLEKIDLDKTHITHMPKEIQELTNLQSLTLCLFEYRSRKSKEYTSSTIIPSGVISKLKGLKHLSIDVNPDDERWEENLQVILPEVSVLECLQTISLYIPAPKLLNLIPPRIFELDFRFTVGKHMSRIISGALPTAEEKFKQSERSLKFVKGFDVPYEVSFAVIHSKALFLDRHMTIKDLSKFGMKSIEQLQVCVLAECKEMQTIVDGRCSGSKDILPRLLVLSVSYMKNLRSICEGVHSSHSFGMLKTLTLHNCPMLTTVFTLDFLGNLSLLKVLVVKDCPKVRALISCGPSTPRAGTFLPKLRTMTLVHLPELISISNGLHTGPCLENIGIYDCPKLERLSKTELSSQNLKVIKGDIKWWEALTWSEAEWGIVGQPSIFDSIFSPIDKQADIMSQLTLDDDTDDSAGGIVGEPLQFSSVTNSSMNNQVDLRTQSGVDHDINYDPAHPSHMMMIMDLIANGSNRSSNASTQASCVANPATVYSINQKGKSASNSDPERFSALDFWFEPSANETQDYNVDTNELAFSSHPAIYSSKSDQFDNSLLDETYC 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2174 1225 SUPERFAMILY L domain-like 571 1021 - -
Alju04g2174 1225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Alju04g2174 1225 FunFam MYB transcription factor 69 116 - -
Alju04g2174 1225 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju04g2174 1225 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju04g2174 1225 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju04g2174 1225 Gene3D - 69 116 - -
Alju04g2174 1225 FunFam MYB-related transcription factor 13 66 - -
Alju04g2174 1225 CDD SANT 16 61 IPR001005 -
Alju04g2174 1225 Gene3D - 392 461 IPR042197 -
Alju04g2174 1225 CDD SANT 69 110 IPR001005 -
Alju04g2174 1225 Pfam Leucine rich repeat 605 662 IPR001611 GO:0005515
Alju04g2174 1225 Gene3D - 13 66 - -
Alju04g2174 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 492 IPR027417 -
Alju04g2174 1225 Gene3D Ribonuclease Inhibitor 542 791 IPR032675 -
Alju04g2174 1225 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 128 - -
Alju04g2174 1225 SMART sant 66 114 IPR001005 -
Alju04g2174 1225 SMART sant 13 63 IPR001005 -
Alju04g2174 1225 Coils Coil 517 537 - -
Alju04g2174 1225 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju04g2174 1225 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju04g2174 1225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Alju04g2174 1225 Gene3D Ribonuclease Inhibitor 842 1033 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2174 Alju-ChrAlju04 53382961 53387231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2174 1 155 MYB Transcription Factor Family AT5G10280 62.577 1.22e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju04g2174 LRR_8 1.6e-08 CL0022