Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2173 ATGGAGATGGATTGTGGACCGTTAAAATTTGGTGTTGACAACAAGAATTCATTTTATCCCACTCCACTTTGTGAAGATCCTGCCGAGAAAGAACCATATGACTCCTCCAATACTGACTCAGAATTCACAGGAGCTTCTTCTATTCTGATAGAGTCACTTCTGCTACCCAGATTTAGAAAGAAGAAACCTTGCAAGCGGATGGAGGATAAGATTCTGAGCTGGGGAGTTTATGAGTTGTTCATCTCAGAAGAAATCAATCCCATATCAATTTCAAATGGAAACATAACGTTTTCCCTCGACTCCTGGGCATTGTTAAAATCTACAGCATCACTGCCTCTTAGACCTGCTAGTTTGGCTAGATTCCTCGAACGAAAGCAACTTGCTGAAAGAAGCAGCTGGTCCAAGCTTGAATATAATGGCAATCTATGGCTGCCCAAAACTCTAAAGCCTTTCATTGTGGGAACTGTCCAGCCAAATTCTGAAGGGAAGGCTAGTGGGTTGGTCTACGATGGAGCAACTATTAGTGGGAGTTCATTGGTTTGCGAGGTTTTTAGGATCATGGAAATTCTTCAGAACAACGAAGAAGAGTCTGATTCAAAATTATTTGAGTTGCTGAGGAGGCTCCAGCGGATGGAAGTGACTGTGGATCTTCTAAAGAACTGGAAAGAAATGGTTGTTGAGTGGTTCCATGCTACTGCAACCAACACAGATTCCTCCATGAACATTCAAATCGACTTAAGCACTCAATCTGGGGTAGATGATGATGATTTACACAATCATCCGGGAGAGGCAACACTAGCAGCCTCACGTGTGACAGATCCATCTATAACTTGCAGCATAAATCAGCCTGTCGTTAATGCATTGAAGAACAACTTACAGCAAGTGAAGGCTCAAAGTGTTTTGCGTGGAAAAGAAATAGAGGAGGTAGCTTCTGTAACAGGTTATCAAGAAGTTACAGATCAAGTTGGAGATTCAAATTCCTTAAAGAGGAAGATGACTTGCAAGGCTTGCAAAGTCAAAGAAGTGTGTGTTTTATTGTTGCTTTGCAGACATTTGTGTCTGTGTAAGGATTGTGAAGTATTTATTAATCTTTGCCCTGTCTGTGGGATCATAGAAGTTGCCGGTGTTGAAGTACTTATTATTCTCATAATGGAAGGTGATCCCCACCCAGCAGTAATTAAAGGTCAGATGTCGTTTCGAAGTATTAATCCACGAATTGATCAAATTCTTGCCCATATATGTAGAGATTCCATGAAGGAGATGCAAGACTCCATCGGCCAGCAGCTGAAACATCTAATTCTAGAAATCAAAGTGGAAATTTTTTCATCAGAGAAGAGCCCACTAATTTGCAGCTCTACCCAACAGGAGGAGGTTTGGGCTTCATCAACTCCAGAGGAAACACCTGATCACCTGCTCTACCCAACAGGAGGAGGTGATCACGGAGCTATGGATATCTTAATCCAAGAGCATTCAAATGATAAGCATGTCCAATTGCCGGAGGACACAGATGCTGTTTTGCATTCATTGAACACCCCAACCCCTTTCTTAATCAAGAAATGTGGATTAGGGTTGACGGCACCACCAAAGGATGAGGCATGGCATAATGTTGTGCGTATGGAACTTGCAAACAATAAACTGTCTGAGCTGCCTTTGTCTCCAAGCAGCCTTGAACTCGAAGTGTTAATGTTGCAGGGAAATGTTGAGTTAACAAGAATCCCAAATACGTTTTTCTGTAAAATGCCCTTGCTTTCGATCCTAGACTTATCTTACACCAGTGTACGAGAACTACCAGGCTCTCTTTTTGAGTTGGAGCAGCTCAGACAACTGTATTTGAAAGGTTGTGATTGTTTCATGAAATTATCACCCAAAATTGGGAAATTGAAGAAACTTGAGAAGCTTGATCTTGATGGGACTCAGATCATACATCTGCCAGAAGAGATTCAAGAGCTAACCAATCTCCAAAGCTTATTCCTTTGCGTCTATGAATATCGTGGCAGAAAAGGCAAGCAATATACGAGCCCAACAATTATTCCATCTGGGGTAATCTCAAAACTCAAGGGGTTAAAACATTTAAAGATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGTACGAGACATTCTTCCTGAAATATTGGGATTAGAGCATTTGCTGACTCTTAGCTTATATATCCCACATTTGGAACTTCTAAAGACCATACCAGACCGTATGTTTCAGGTTGATTTTAGATTTATTGTTGGTAGGCACATGCAAAGGTTCATATCAAGTACACCATCCACATGTGATGCAAAATTTAAACAAAGTGGATGTAGCTTGAAGTTTGTAAATGGTGATGATGTCCCTAATGAAATTCAAAGGCTTGCTAGGCACAGTAAGGCTTTATTTCTGGAGCGACACAAGACAATCAAGACTCTGTCGGAATTTAAAATAATGAATTTAGAACAGCTGCGCATATGTATGTTAGCAGAATGTAGAGAAATGCAAACAGTTGTTGATGGCAGACAATCAAACAGGAATAATGATATTTTATCACATTTGTTGTACTTGTACATATCACACATGAAGAGTTTAAGAAGCATATGGGAAGGGCCAGTTCCAGCTCGCTGTTTTTTGGGTATGCTGAAGTCTTTAGTATTGCAAAATTGCCCTGAGCTAACTACTGTCTTTACCATGGATTTTTTGGGCAATCTTTCACTATTAAAGGAGCTTATAGTTAAGGCTTGTCCCAAAGTAACCACCTTGATAAGTGATGGATCATTCAGACATAAAATAGAGGTATTCCTGCCTAAATTGAGAAAGATTATGCTTCTACAACTTCCTGAGTTGATCAGCATATCCAATGGTTGTTGCATAGGCCCAAGCCTGAATAAAATTGCAATTTATGATTGCCCAAAACTCCAAAGCCTTTCAAAGTGGGAATTGTCCAGCCAAAGTCTGGAGATCATTCAGGGAGAAATGAAGTGGTGGGACCAACTGCAATGGAGAGAAGAATGGGGAATATCGCAACGACCATCTAGGTTTGATCGCATCTTTTCCTCCGTTGATAATCTGGTTGATATAATGACTCAAATTGGGATTGATGGTGATGATATTGACGATGATGCAGCAGATATGACGCTGCCACAGACTTTATTTGAGCATCCAAAGCAAAATGCCGACAGTTTCAGCAGTGTCAAGCAAAATGCCGACACAGTCGCTTTTCAAGTGCGAAGTGAAGGAGAAGTTTTAGATGATGGGTTCAGGTGGAAGAAATGTGGGCATAAGATAATGCATGCATCAAAAAATCCAAGGAGGCATAGAAGGAAAGATGATGCAGAGAAGACATTGATGGTTTCAGCACATCGGTTTGGTAACACAGAGATTCCACCAGATGATGGGTTCATTTGGAGAAAATATGGCCAGAAACAGATCTTCGGCTCTATTTACCCCAGGGGTTACTACAGGTGCATCCACCGGAATTTATATAATTGCCTAGCGCTGAAACAAGTGCAGCGTCTGGATGGTAACCCTAACATATTTGCAGTGACATATAGAGGCAGCCACACGTGCCACATGTCATCCACAGCTTCATCTTCATCAGTTCCTCCACAACTAATAATCTCACAAGAGTCATGTGACATCACACGCATTAGTGCCACTACCTCCTCCCAATTGTCTTCTTCTAATTCGGTTTCTGGTTCGTTGTCTTTTGACCACCCCAGCCTCTTTGCCAGGGGCAGTGGCAGTGGTGTGACTCCGGGCGGTGCAGAAGCTAGTGGCACTGGTCCCTTCACATCAAGTTTCGGAGCTGATTACCCGGTGGCAGATATGGCTGATGCCATGTTTAATTCAGGTGAAATAGAGAGTAGCGAGCCGCTGCATAAAGATGCCTCCTCACGATGGACGGAGAGTGAGGTCTTTGATAATGCCTCCAATACTGACTTTGCTTCCGCCTCATTTTGTGGAGATCCTATATTGGAAGAACCATATGACTCCCATGCAAAATCAGTTTCTTTTGTTCACAGTTCCGAATCTGACCTCGATTCTCTCTCCGACAACAGTGACTTTGAGCAGATCATGCTCACGTCCTCCAAAGGATTTATTTGA 4092 0.4198 MEMDCGPLKFGVDNKNSFYPTPLCEDPAEKEPYDSSNTDSEFTGASSILIESLLLPRFRKKKPCKRMEDKILSWGVYELFISEEINPISISNGNITFSLDSWALLKSTASLPLRPASLARFLERKQLAERSSWSKLEYNGNLWLPKTLKPFIVGTVQPNSEGKASGLVYDGATISGSSLVCEVFRIMEILQNNEEESDSKLFELLRRLQRMEVTVDLLKNWKEMVVEWFHATATNTDSSMNIQIDLSTQSGVDDDDLHNHPGEATLAASRVTDPSITCSINQPVVNALKNNLQQVKAQSVLRGKEIEEVASVTGYQEVTDQVGDSNSLKRKMTCKACKVKEVCVLLLLCRHLCLCKDCEVFINLCPVCGIIEVAGVEVLIILIMEGDPHPAVIKGQMSFRSINPRIDQILAHICRDSMKEMQDSIGQQLKHLILEIKVEIFSSEKSPLICSSTQQEEVWASSTPEETPDHLLYPTGGGDHGAMDILIQEHSNDKHVQLPEDTDAVLHSLNTPTPFLIKKCGLGLTAPPKDEAWHNVVRMELANNKLSELPLSPSSLELEVLMLQGNVELTRIPNTFFCKMPLLSILDLSYTSVRELPGSLFELEQLRQLYLKGCDCFMKLSPKIGKLKKLEKLDLDGTQIIHLPEEIQELTNLQSLFLCVYEYRGRKGKQYTSPTIIPSGVISKLKGLKHLKIDVNPDDERWYENVRDILPEILGLEHLLTLSLYIPHLELLKTIPDRMFQVDFRFIVGRHMQRFISSTPSTCDAKFKQSGCSLKFVNGDDVPNEIQRLARHSKALFLERHKTIKTLSEFKIMNLEQLRICMLAECREMQTVVDGRQSNRNNDILSHLLYLYISHMKSLRSIWEGPVPARCFLGMLKSLVLQNCPELTTVFTMDFLGNLSLLKELIVKACPKVTTLISDGSFRHKIEVFLPKLRKIMLLQLPELISISNGCCIGPSLNKIAIYDCPKLQSLSKWELSSQSLEIIQGEMKWWDQLQWREEWGISQRPSRFDRIFSSVDNLVDIMTQIGIDGDDIDDDAADMTLPQTLFEHPKQNADSFSSVKQNADTVAFQVRSEGEVLDDGFRWKKCGHKIMHASKNPRRHRRKDDAEKTLMVSAHRFGNTEIPPDDGFIWRKYGQKQIFGSIYPRGYYRCIHRNLYNCLALKQVQRLDGNPNIFAVTYRGSHTCHMSSTASSSSVPPQLIISQESCDITRISATTSSQLSSSNSVSGSLSFDHPSLFARGSGSGVTPGGAEASGTGPFTSSFGADYPVADMADAMFNSGEIESSEPLHKDASSRWTESEVFDNASNTDFASASFCGDPILEEPYDSHAKSVSFVHSSESDLDSLSDNSDFEQIMLTSSKGFI 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2173 1363 Gene3D Death Domain, Fas 239 342 IPR011029 -
Alju04g2173 1363 Gene3D WRKY domain 1112 1188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 SUPERFAMILY WRKY DNA-binding domain 1122 1187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 SMART LRR_typ_2 716 742 IPR003591 -
Alju04g2173 1363 SMART LRR_typ_2 627 650 IPR003591 -
Alju04g2173 1363 SMART LRR_typ_2 580 603 IPR003591 -
Alju04g2173 1363 ProSiteProfiles WRKY domain profile. 1073 1116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 SMART WRKY_cls 1125 1187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 ProSiteProfiles WRKY domain profile. 1126 1188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 Gene3D Ribonuclease Inhibitor 770 999 IPR032675 -
Alju04g2173 1363 Gene3D Ribonuclease Inhibitor 526 744 IPR032675 -
Alju04g2173 1363 Pfam Leucine rich repeat 557 614 IPR001611 GO:0005515
Alju04g2173 1363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1048 1324 IPR044810 GO:0003700
Alju04g2173 1363 Gene3D - 343 370 - -
Alju04g2173 1363 Gene3D WRKY domain 1066 1111 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g2173 1363 SUPERFAMILY L domain-like 523 983 - -
Alju04g2173 1363 Pfam WRKY DNA -binding domain 1126 1185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2173 Alju-ChrAlju04 53363369 53382773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2173 1094 1201 WRKY Transcription Factor Family AT2G40740 57.798 5.66e-38 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju04g2173 WRKY 3.9e-22 CL0274