Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2154 ATGTCTGGGGTGGAGATAGCGATAGCTGGGATAGTTCTTTCTGCTGCTGCGACTGCTGTGGCACCTTCATTTGCAGAACTTGTTAAAAAAAAAATAACCGAGAAAAAAAAATCACTTGTTGACTTGCATGAAGTGCTAGAGAAGGGATTAAAGGAGCTACTTGCTTTACAAAGTGAAAAAGACGGAGAAGTTTCAAAAAACAAAGAACAGAAAGATCCTTCTGAGCTTTACAAGCTCTGGAAGACGTCGGTATCAGATATTGAGAAAACGGTGATTTCCTTAGATGAAGAATATAAACAAGTAAAGGAAAAGAAATGGAGTCATTGGAAAAGAAGGGCTCATGTTAAGAAAGAGATCAAAAGGGCACTGAATGAAGTAATCAATCTTCTTGGAAAATGCAAAGATATGAATGTTCTAGTTGATAAGCTGCCAGAGCGGGTCAAAAAAGAGTATGATGTCCCACTAATTGCGGAGTATCCGACTCTTCAGAAAGCCTTTCAAGACATTCAGGATCTCATACAACTTAAAGAACTAAAATGTGTGGCACTTTATGGACATAAAGGGGTGGGGAAAACAACAATAATGCAACACTTAAATAACCACCACTTCAATGATAGCTCTGACAATAAGGAGTTTGATATGGTGATTTTCATCAAAGTGGCGGCTGCTGAACAGACTAATGAGCGTACTGAATGCTTTCACATTCTGCAGAAAATTGCAGAGCGAATGAGGGAGGATACAAAAGGCAAGGAACTTGAAGTTGCTGAAAGAATACAGGGAGGGCTCAAGAACAAAAGATATTTACTGATTTTAGATGGCTTAAGGTATGCATTCGCACTTGATTGGATTTTGGGGACGTTATTGGATATTTCAGAAGACAAAAAAGATAGTAAGGTGGTAATAACCACTCAGTATGATCTTTCTTGGAACTCCAAATATGTTAACAGGAAACTTAAGCTCAAACCGTTATCCCTTGATGAAGCATTGGTTATGTTTCGAAATATTGCCGGTGACAATCATTTACCAGAAAAAGGAATTGCTCAACTGGTATGTAAGAAGTTCTGCTGTCGTCTTCCCCTCCTAATAGATCGTATTGCAACGTCTTTTAAGTATCAAGAGGCTCCCATTGATTGGCAGAAGGCTGTGAATGAATGCACGCCTTGGCCTCAAGTTACTCATTGGCTGAGGGATTTGAATGAAGGGACGTCTGGGCCTCAAGTTGGAGATGATGATTCAAGAGATTTATACTCAAACTTGGAAATTTGTTTTCGAATGTTGGGTGATCAAAGCAAACAAAAATGCTTCCTTTATGCTTCACTATATCCTGCAGACAGCGAGATATGCACACATTACTTAGTGGAGTGTTATATAGTTCAGGGCTTTCTTGGTGATGTTGATGCAGATACTAAATACGTTGAAATGCGCAACACAGCTAAAAATGTAATATTGAGGCACTTGGTCAATGTCGCATTCTTGGAGGAAGGGGAACAAATGAGTTATGTTAAAATGACTGATTTCTATAGGCAACTTGCTTTATATATCTCATCCAAAGATCCAAATTCAGAATGCAGAATTTATGTTGATAATGAACAACATAAGGAAGCCTTTAGATCAACATCATGGAAAGATGCTAAATGGGTTTCTATGGTTGACAGCAAAAGGGATAGTCTTCCAACAAGCCAAAATTATGAGAGTCTTCAGACACTATTGCTACAAAATTCGAAGTTGGTTGAAATTCCACCAACCTATTTTGGTAGAATGGGCAATCTCCTTGTGCTAAACTTAAATGGTACTAAAATAAAGATGTTACCATCTTTGTTGAGGTTAACTAATCTTAAGGCGCTCTATCTAAATGATTGTTTGGACTTGCACATATCTGAAAATGATATCCAACCACTTCAACATCTTGAGGTATTAGACATTCGAGGTACTCCAGTAAATTTTGTGCCTGACTTGAAAAATTTGAGGTGCCTAAGATTCTCATATACTGCAAGTATTAGTGACTGCCATCATAAAATTTCAACGCTTCACAATTTAGAAGAATTGAACATTCAAGTTGAAAGGCAACTCCAACAGCAATGGAGTAACTATGTTAAAGATCATATTGTACAAATCGCTGCTCAAAGAAATCTATCTTTTATATGTAATGTGTGA 2154 0.377 MSGVEIAIAGIVLSAAATAVAPSFAELVKKKITEKKKSLVDLHEVLEKGLKELLALQSEKDGEVSKNKEQKDPSELYKLWKTSVSDIEKTVISLDEEYKQVKEKKWSHWKRRAHVKKEIKRALNEVINLLGKCKDMNVLVDKLPERVKKEYDVPLIAEYPTLQKAFQDIQDLIQLKELKCVALYGHKGVGKTTIMQHLNNHHFNDSSDNKEFDMVIFIKVAAAEQTNERTECFHILQKIAERMREDTKGKELEVAERIQGGLKNKRYLLILDGLRYAFALDWILGTLLDISEDKKDSKVVITTQYDLSWNSKYVNRKLKLKPLSLDEALVMFRNIAGDNHLPEKGIAQLVCKKFCCRLPLLIDRIATSFKYQEAPIDWQKAVNECTPWPQVTHWLRDLNEGTSGPQVGDDDSRDLYSNLEICFRMLGDQSKQKCFLYASLYPADSEICTHYLVECYIVQGFLGDVDADTKYVEMRNTAKNVILRHLVNVAFLEEGEQMSYVKMTDFYRQLALYISSKDPNSECRIYVDNEQHKEAFRSTSWKDAKWVSMVDSKRDSLPTSQNYESLQTLLLQNSKLVEIPPTYFGRMGNLLVLNLNGTKIKMLPSLLRLTNLKALYLNDCLDLHISENDIQPLQHLEVLDIRGTPVNFVPDLKNLRCLRFSYTASISDCHHKISTLHNLEELNIQVERQLQQQWSNYVKDHIVQIAAQRNLSFICNV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2154 717 SUPERFAMILY L domain-like 497 685 - -
Alju04g2154 717 Pfam NB-ARC domain 170 384 IPR002182 GO:0043531
Alju04g2154 717 Gene3D Ribonuclease Inhibitor 537 712 IPR032675 -
Alju04g2154 717 PRINTS Disease resistance protein signature 261 275 - -
Alju04g2154 717 PRINTS Disease resistance protein signature 607 623 - -
Alju04g2154 717 PRINTS Disease resistance protein signature 180 195 - -
Alju04g2154 717 PRINTS Disease resistance protein signature 355 369 - -
Alju04g2154 717 Coils Coil 84 104 - -
Alju04g2154 717 Pfam Leucine rich repeat 565 620 IPR001611 GO:0005515
Alju04g2154 717 Gene3D - 140 311 IPR027417 -
Alju04g2154 717 PANTHER DISEASE RESISTANCE PROTEIN RP 86 692 IPR044974 GO:0006952
Alju04g2154 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 437 IPR027417 -
Alju04g2154 717 ProSiteProfiles Leucine-rich repeat profile. 589 610 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2154 Alju-ChrAlju04 52978647 52980800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2154 177 387 WRKY Transcription Factor Family AT5G45050 23.853 7.07e-06 47.8