Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju04g2152 | ATGGAGAGGCCAGGGTTAGTACACCATCTCAGTCGCAATACAAACAAGCTTGAACTTATGCTACTACCAGTTTTTGGTGATCCGGGCATTGAGGGACGAACTTTGCGCCGGCCAAAGAACATCTTGGACATCATCCGTTTCTTCTTTTTTTTCCCCCTTGCAATGGGAAGGAAAAAATCAGAGGAAGCTGGCCCTGCTACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCCAGTATGGATGAAAAACCTGATAAACCAAAAAAAGTATCTTCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGTTTCTGCATATACTGACGGTATTGATCTTCCTCCCTCTGATGATGAAGATGAAGAAGTCATGGAAGAGGAGCAAGAACAAAATAGTGTGCCTAAGCGGTCCACTCATCAGCAAAAGGCTGACTTAAAGCCTCTTGATGTGGATGTCAGTGACAAAGAGTTGAAAAAGCGTGTAAAGAAGGATCTTCTTGCTGCCCATGCTGCAGAGTTGGCTAAGCGGGAAGCACTTAAGGATGACCGTGATGCGTTCACTGTGGTCATCGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGATGCCGATGCCAATGTGAAAGATGTGACAATAGAAAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTAAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGCAAGTCCACACTGTTGAAGCTCCTTGCGTGGAGGAAGATACCAGTGCCGAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTCTTGAAGAAAGTGGAGACAAGGATGATGGCTATGAAGATGATGCAGGGGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTGATGGGATCTGACGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGTTTAGGTTTTACAAAGGATATGCAGGGTCGCGCTACAAAATCATTTAGCGGGGGTTGGAGGATGAGAATTTCTTTAGCCCGTGCACTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGATCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTAGTCTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAGATTATTCATCTGCATGATATGAAGCTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAGGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGATGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCTGCTTCTAAGGAATCAGCAAAAAGCAAGGGCAAGGGCAAGGTTGATGAGGATGAAGCCCCAGCAGAGGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGTTTCAGCTATCCAAATCGACCCGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTGGCCATTGTTGGGCCTAACGGAGCTGGGAAATCAACACTGCTGAATCTTCTTGCTGGTGACTTGTCTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACCATGGATGAAACACCGGTTCAGTATCTTCTTCGTCTCCATCCAGATCAGGAAGGACTCAGCAAGCAAGAAGCCGTCCGAGCAAAACTCGGTAAGTTTGGATTGCCTAGCCATAATCATCTTACCCCTATTGTCAAGCTATCAGGAGGGCAGAAAGCTCGAGTGGTATTCACGTCTATATCCATGTCAAACCCCCACATTTTGCTATTGGATGAACCAACTAATCATCTTGATATGCAAAGTATTGACGCGTTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTCGTTAGTCATGATTCTAGATTGATATCACGTGTATGTGAGGATGAAGAGAGAAGTCAAATATGGGTAGTTGACGAAGGTACTGTCAATTTCTTTGATGGAACTTTTGAGGATTACAAGGACGAGCTGCTGAAAGAAATTAAAGCTGAAGTTGATGATTGA | 2322 | 0.4393 | MERPGLVHHLSRNTNKLELMLLPVFGDPGIEGRTLRRPKNILDIIRFFFFFPLAMGRKKSEEAGPATKAKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKAKSAPKVSAYTDGIDLPPSDDEDEEVMEEEQEQNSVPKRSTHQQKADLKPLDVDVSDKELKKRVKKDLLAAHAAELAKREALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNASSLEESGDKDDGYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDMKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAASKESAKSKGKGKVDEDEAPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSNPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVDEGTVNFFDGTFEDYKDELLKEIKAEVDD | 773 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju04g2152 | 773 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 214 | 462 | IPR027417 | - | |
Alju04g2152 | 773 | Coils | Coil | 463 | 483 | - | - | |
Alju04g2152 | 773 | Coils | Coil | 290 | 310 | - | - | |
Alju04g2152 | 773 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 214 | 474 | IPR003439 | GO:0005524 | |
Alju04g2152 | 773 | CDD | ABCF_EF-3 | 546 | 748 | - | - | |
Alju04g2152 | 773 | SMART | AAA_5 | 572 | 747 | IPR003593 | GO:0016887 | |
Alju04g2152 | 773 | SMART | AAA_5 | 238 | 453 | IPR003593 | GO:0016887 | |
Alju04g2152 | 773 | CDD | ABCF_EF-3 | 214 | 442 | - | - | |
Alju04g2152 | 773 | MobiDBLite | consensus disorder prediction | 117 | 131 | - | - | |
Alju04g2152 | 773 | MobiDBLite | consensus disorder prediction | 81 | 153 | - | - | |
Alju04g2152 | 773 | ProSitePatterns | ABC transporters family signature. | 371 | 385 | IPR017871 | GO:0005524|GO:0016887 | |
Alju04g2152 | 773 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 189 | 767 | - | - | |
Alju04g2152 | 773 | Gene3D | - | 510 | 772 | IPR027417 | - | |
Alju04g2152 | 773 | Pfam | ABC transporter | 229 | 399 | IPR003439 | GO:0005524 | |
Alju04g2152 | 773 | MobiDBLite | consensus disorder prediction | 479 | 521 | - | - | |
Alju04g2152 | 773 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 525 | 761 | IPR027417 | - | |
Alju04g2152 | 773 | Gene3D | - | 211 | 497 | IPR027417 | - | |
Alju04g2152 | 773 | MobiDBLite | consensus disorder prediction | 132 | 153 | - | - | |
Alju04g2152 | 773 | Pfam | ABC transporter | 563 | 698 | IPR003439 | GO:0005524 | |
Alju04g2152 | 773 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 546 | 771 | IPR003439 | GO:0005524 | |
Alju04g2152 | 773 | FunFam | ABC transporter F family member 4 | 212 | 495 | - | - | |
Alju04g2152 | 773 | FunFam | ABC transporter F family member 4 | 511 | 773 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju04g2152 | Alju-ChrAlju04 | 52924719 | 52928871 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju04g2152 | 546 | 749 | Calmodulin-binding Proteins | AT2G36910 | 28.251 | 2.41e-12 | 68.9 |