Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2152 ATGGAGAGGCCAGGGTTAGTACACCATCTCAGTCGCAATACAAACAAGCTTGAACTTATGCTACTACCAGTTTTTGGTGATCCGGGCATTGAGGGACGAACTTTGCGCCGGCCAAAGAACATCTTGGACATCATCCGTTTCTTCTTTTTTTTCCCCCTTGCAATGGGAAGGAAAAAATCAGAGGAAGCTGGCCCTGCTACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCCAGTATGGATGAAAAACCTGATAAACCAAAAAAAGTATCTTCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGTTTCTGCATATACTGACGGTATTGATCTTCCTCCCTCTGATGATGAAGATGAAGAAGTCATGGAAGAGGAGCAAGAACAAAATAGTGTGCCTAAGCGGTCCACTCATCAGCAAAAGGCTGACTTAAAGCCTCTTGATGTGGATGTCAGTGACAAAGAGTTGAAAAAGCGTGTAAAGAAGGATCTTCTTGCTGCCCATGCTGCAGAGTTGGCTAAGCGGGAAGCACTTAAGGATGACCGTGATGCGTTCACTGTGGTCATCGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGATGCCGATGCCAATGTGAAAGATGTGACAATAGAAAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTAAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGCAAGTCCACACTGTTGAAGCTCCTTGCGTGGAGGAAGATACCAGTGCCGAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTCTTGAAGAAAGTGGAGACAAGGATGATGGCTATGAAGATGATGCAGGGGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTGATGGGATCTGACGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCAGGTTTAGGTTTTACAAAGGATATGCAGGGTCGCGCTACAAAATCATTTAGCGGGGGTTGGAGGATGAGAATTTCTTTAGCCCGTGCACTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGATCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTAGTCTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAGATTATTCATCTGCATGATATGAAGCTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAGGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGATGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCTGCTTCTAAGGAATCAGCAAAAAGCAAGGGCAAGGGCAAGGTTGATGAGGATGAAGCCCCAGCAGAGGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGTTTCAGCTATCCAAATCGACCCGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTGGCCATTGTTGGGCCTAACGGAGCTGGGAAATCAACACTGCTGAATCTTCTTGCTGGTGACTTGTCTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACCATGGATGAAACACCGGTTCAGTATCTTCTTCGTCTCCATCCAGATCAGGAAGGACTCAGCAAGCAAGAAGCCGTCCGAGCAAAACTCGGTAAGTTTGGATTGCCTAGCCATAATCATCTTACCCCTATTGTCAAGCTATCAGGAGGGCAGAAAGCTCGAGTGGTATTCACGTCTATATCCATGTCAAACCCCCACATTTTGCTATTGGATGAACCAACTAATCATCTTGATATGCAAAGTATTGACGCGTTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTCGTTAGTCATGATTCTAGATTGATATCACGTGTATGTGAGGATGAAGAGAGAAGTCAAATATGGGTAGTTGACGAAGGTACTGTCAATTTCTTTGATGGAACTTTTGAGGATTACAAGGACGAGCTGCTGAAAGAAATTAAAGCTGAAGTTGATGATTGA 2322 0.4393 MERPGLVHHLSRNTNKLELMLLPVFGDPGIEGRTLRRPKNILDIIRFFFFFPLAMGRKKSEEAGPATKAKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKAKSAPKVSAYTDGIDLPPSDDEDEEVMEEEQEQNSVPKRSTHQQKADLKPLDVDVSDKELKKRVKKDLLAAHAAELAKREALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNASSLEESGDKDDGYEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDMKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAASKESAKSKGKGKVDEDEAPAEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSNPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVDEGTVNFFDGTFEDYKDELLKEIKAEVDD 773
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2152 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 462 IPR027417 -
Alju04g2152 773 Coils Coil 463 483 - -
Alju04g2152 773 Coils Coil 290 310 - -
Alju04g2152 773 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 214 474 IPR003439 GO:0005524
Alju04g2152 773 CDD ABCF_EF-3 546 748 - -
Alju04g2152 773 SMART AAA_5 572 747 IPR003593 GO:0016887
Alju04g2152 773 SMART AAA_5 238 453 IPR003593 GO:0016887
Alju04g2152 773 CDD ABCF_EF-3 214 442 - -
Alju04g2152 773 MobiDBLite consensus disorder prediction 117 131 - -
Alju04g2152 773 MobiDBLite consensus disorder prediction 81 153 - -
Alju04g2152 773 ProSitePatterns ABC transporters family signature. 371 385 IPR017871 GO:0005524|GO:0016887
Alju04g2152 773 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 189 767 - -
Alju04g2152 773 Gene3D - 510 772 IPR027417 -
Alju04g2152 773 Pfam ABC transporter 229 399 IPR003439 GO:0005524
Alju04g2152 773 MobiDBLite consensus disorder prediction 479 521 - -
Alju04g2152 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 761 IPR027417 -
Alju04g2152 773 Gene3D - 211 497 IPR027417 -
Alju04g2152 773 MobiDBLite consensus disorder prediction 132 153 - -
Alju04g2152 773 Pfam ABC transporter 563 698 IPR003439 GO:0005524
Alju04g2152 773 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 546 771 IPR003439 GO:0005524
Alju04g2152 773 FunFam ABC transporter F family member 4 212 495 - -
Alju04g2152 773 FunFam ABC transporter F family member 4 511 773 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju04g2152 Alju-ChrAlju04 52924719 52928871 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2152 546 749 Calmodulin-binding Proteins AT2G36910 28.251 2.41e-12 68.9