Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2149 ATGGGTTGCTTATGCTCCAAAGGGACACATTCACACGATTATGTCGCAGAGAACCATGTCCAGAAAACGAAGAAATCCTCAAAGGGTTCGTCAAGGAGGGATAAAAAACATGCAATGCAAGAGGAATGTAGTGGACCAAACGATGTAAATATAAGGTTGATATCATCAGATGAGAGTGAGAAGAATGTTGGGACAACAGGGAAACCTGGGAGTTCGCAAAGTAGAAGTATCGAAGAAGGACCAAGTAGGATGATGATGTTGAATAGGATAGGTAGTTTAAGAAGAGGAGAGAGAGGAGCCCAAGTTCTTGCTGGGTGGCCTTCATGGCTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGATTGGACAAGGGACATATAGCAGTGTTTACAAAGCTAGAGATCTGGAGAAAAATAAAGTAGTTGCATTAAAGAAGGTTCGATTTGCAAATATGGACCCTGAAAGTGTTCGTTTCATGGCCAGAGAAATCATTATATTACGAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAGGCATGATAACCTCAAGAGTTTCTGGCAGCTTGTACCTTATTTTTGATTATATGGAACATGATCTCACTGGCCTCGCAGCTCTTCCTGGCATCAAGTTTTCTGAAGAACAGATAAAGTGCTACATGCAGCAGCTATTGAGAGGGTTAGAGCATTGTCACAAGAAGGGGGTGCTACACAGAGACATAAAAGGAGCAAATTTGCTAATAGACTATAAGGGCAATTTGAAAATTGCAGATTTTGGGCTAGCCACTGTGGTGGATGGCCAATCATTGACTAGTAGAGTTGTAACCTTATGGTACAGATCACCTGAACTATTACTTGGAGCCACAGATTATGGTGTTGGCGTTGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTCTTCGCTGGCGAGCCTATCTTGCCTGGTCGAACAGAGGTGGAGCAACTGCACAAGATATTTAAACTGTGTGGATCACCTTCTGAGAGATACTGGAAGAAGTCGAAGTTACCACATGCCACCATTTTCAAACCTCAACACCCTTACAAGCGCATTGTTGCAGAGACATTCAAGCATTTCCCACCCTCTGCCCTTAAACTTCTTGATGGGCTTCTTGCTATAGAACCTGACGATCGAGGAACTGCTTCCTTAGCACTTCAGAGCGAGTTCTTCACGACAAAGCCGCTTCCTTGTGAGCCATCAAGCATGCCAAGGTATCCACCAAGTAAGGAGTTTAATGTGAAGCTTCGAGAAGATGAAGCCAGAAGGTATATGTCAATGTCATCCCATCTCTTCATCATGCACCTTGTGCTTTTATCCTATCATATTTGCTCTCTATTAATTGGGGACTTTCTGAGATTCATCTATGTTACAAATTTGGTATGTTATTGCAACAGAAAAAGAGGGACAACGAGGAAAGGAAATGAACCAGAACTCTTCAAGAGTTCTGTAAACCCTAAAGCTGTCCCACCACCTGATAATGCCAAGTCCCACCTTTCAGCAGCCACAGAGAATCGAGTAGAGCCAAAGGCAAGGCGGAGAGGGGAGAAGAACGGGCTGCTGTTAGAACCATCAAGCACAAGGGGACCAAAAGTACTGTGTCGTTCAGGCCAATCCACGGTGCAGAGCGCTTACATGAAGTTCATCAAGCATGAAGCTGCAGGAGAACGTGAGGTGTTTGTTGGAAGCAGGAGAAAGCATGGAGCCTATAGGAATGCCGCCAATGCCGCCTGTCTCTCCAAGTTCTCTAACTCCGTGGCCGCCGATGCCGGCTCCCGGCTCCAGGCGATGGCCAACGGACGGAACTCCTCCTCCGTCTGGGGAGACGGCGGCGGCTTCGGCCAGAGGTATAGAGAATCCGACCTCTTGCTGCCTGCATCCAACATGTCTGGTCGCAACAAGCCTCTTACCAAGGAATATGGAGGGAAGAGTGGGAAGATGCAATATTCAGGGCCGTTGGAATCAGCAACGGAGAACCTAGAAGAAATGCTGAAGCAACACGAACAACAAATTCAACAAGTCTTGCGTAAAGGTGCTTTGGATCATAAGCTCAGGACTTAA 2118 0.458 MGCLCSKGTHSHDYVAENHVQKTKKSSKGSSRRDKKHAMQEECSGPNDVNIRLISSDESEKNVGTTGKPGSSQSRSIEEGPSRMMMLNRIGSLRRGERGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKIGQGTYSSVYKARDLEKNKVVALKKVRFANMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLIFDYMEHDLTGLAALPGIKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDYKGNLKIADFGLATVVDGQSLTSRVVTLWYRSPELLLGATDYGVGVDLWSAGCILAELFAGEPILPGRTEVEQLHKIFKLCGSPSERYWKKSKLPHATIFKPQHPYKRIVAETFKHFPPSALKLLDGLLAIEPDDRGTASLALQSEFFTTKPLPCEPSSMPRYPPSKEFNVKLREDEARRYMSMSSHLFIMHLVLLSYHICSLLIGDFLRFIYVTNLVCYCNRKRGTTRKGNEPELFKSSVNPKAVPPPDNAKSHLSAATENRVEPKARRRGEKNGLLLEPSSTRGPKVLCRSGQSTVQSAYMKFIKHEAAGEREVFVGSRRKHGAYRNAANAACLSKFSNSVAADAGSRLQAMANGRNSSSVWGDGGGFGQRYRESDLLLPASNMSGRNKPLTKEYGGKSGKMQYSGPLESATENLEEMLKQHEQQIQQVLRKGALDHKLRT 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2149 705 MobiDBLite consensus disorder prediction 493 553 - -
Alju04g2149 705 SMART serkin_6 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2149 705 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Alju04g2149 705 FunFam probable serine/threonine-protein kinase At1g54610 212 449 - -
Alju04g2149 705 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Alju04g2149 705 PANTHER CELL DIVISION PROTEIN KINASE 127 416 - -
Alju04g2149 705 MobiDBLite consensus disorder prediction 49 79 - -
Alju04g2149 705 Coils Coil 672 696 - -
Alju04g2149 705 CDD STKc_CDK9_like 129 410 - -
Alju04g2149 705 Pfam Protein kinase domain 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2149 705 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Alju04g2149 705 MobiDBLite consensus disorder prediction 522 538 - -
Alju04g2149 705 Gene3D Transferase(Phosphotransferase) domain 1 217 449 - -
Alju04g2149 705 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2149 705 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Alju04g2149 705 MobiDBLite consensus disorder prediction 645 668 - -
Alju04g2149 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Alju04g2149 705 MobiDBLite consensus disorder prediction 14 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2149 Alju-ChrAlju04 52900747 52905868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2149 121 442 Core Cell Cycle Gene Families AT5G10270 50.588 1.94e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju04g2149 Pkinase 8.7e-69 CL0016