Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2119 ATGGATCTTCTTTTTCTTGCCTGTGTGTTTCTCTTCACCGCCCATTGCTCAGAAGCTATTGCTACTTCTGTCCCTAACGACGTATTGTCCCTTCTCAGCTTCAAGGACTCTGTCTCTTCCGAATCTTCGGGTCTTCTCTCTGGATGGAGTAAGGAGTCTTCTGAAAGTTACTGTCAATGGCACGGCGTCACTTGCGAGAATAGACTCTCTGGCAGAGTTATTGCTTTGAACTTGACCGGACTTCGCGGCGGCAAGCTCACCCCTTCCATTGGAGATATGTCTGAGCTTCGGGTTTTGTCCCTTCCCCACAATGTGTTCTCCGGTGAGATCCCGGAGACTCTGGGGAAGCTTCGGCTTCTGGAGGTTCTTGAGCTTCAAGGAAATAATTTTTCCGGGAGGATCCCAAACCAGATGAGCTATCTTCCATCTCTTCGCATTCTTAACCTCTCTAATAATGCTTTTTCCGGTGCTATACCCGGTAAATTGATTGGCTCTGGAAATGTTAGCGTCATTGACTTGTCCAATAATCAGCTTTCTGGTCCAATTGTAGATAGTTTCAATACTGTCGTTGAATCTTTGATTCATTTGAAGCTGTCCCACAACTTCCTTACGGGCAAAATCCCCTCCGAAATTGGGAAATGCAGAAATTTGAGGACGCTTTTACTCGATGGGAATATCTTAGAAGGCAATATCCCTTATGAGATTGGGAATATGACGGAACTCAGACTTCTAGATGTCTCTAGAAATAGTTTCACCGGAAGGATTCCGAAAGAGATAGCCAACTGCCGGAAACTGTCAGTACTTGTGTTGACTGATTTACTCGATGATAATGCTTCCCCTGATGAGAGCTTGGCGAATAGCTTCAGAGGAGAATTCAATGCTTTTGTTGGAAATATTCCTCCTCAGTTGTTGTTGCTTTCAGGTTTAGAGATCTTGTGGGCACCAAGAGCGAATCTTGGTGGACGGTTGCCTAGGGGCTGGACAGATTCATGCTCGCTGAGAGTACTCAACTTGGCAGAGAATTATATTGTTGGGGGGATACCAGAAACCTTGGGGATGTGCAGAAATTTAACTTTCCTTGACTTGAGCTCTAACAATTTTGTGGGGTATCTTCCCTCAAAGCATCTTCAGGTTCCATGTATGGTGTACTTCAATGTCAGCTGGAATAATCTATCTGGCACACTTCCAGGATTTGGGAAGGAAAGCTGTGATTTAAGCAGAACTCTAGGTGATGTACATGTTGATATTCTAGTTTGGGAATCTCTGATGGATGCTCTCGGCAGATCAGGTTCAGATGGTGCTGTCGTCATTAACCATGATTTCAGTTGGAATAGCTTTACGGGATCTTTACCTTTATTCTCATTAGTAGGTACTACAGACAGTAAGATTTCCTACACGCTATCACTAAATAATAACAAGTTCAGTGAAACTCTACCATATCATTTGGTTTCCAACTGTAATGATCTCAAGATGTTGAAGGTTAACTTGAGTGTGAACCAACTCTCAGGTGGAAATTCCCAAGAATTGCTTCTTGAATGTTTGCAGTTGACAGAATTTGAGGCCTCGTTCAATCAGATTGAGGGTTCAATTGATCCTCATATTGGGGACTATACAATGCTCCAGCGCCTTGATTTGAGGGGGAACAAACTTACTGGACCTCTGCCTGATCAATTGGGAAGCCTGAAAAAAATGAAATGGATGCTTTTAGGAGGGAACAATTTAACTGGAGAAATCCCTTCTCAACTTGGTCAATTGGATTCCCTTGTTGTTGTGGATCTATCTCACAATGCTCTTACTGGCACAATTCCTGCAAGTTTGACAAATGCCACAACTCTTGAAACTCTGTTGCTAGATCACAACCAGCTCAATGGGGAAATACCTTCATCTTTTTCAACTCTCTCCAGTCTTGTTGGCTTTGACGTTTCTTTCAACAACCTTTCTGGTCATATTCCCCATCTTCATCACCCAAGTGATTGTGACTACTTCAAGGGGAATGTACACCTGCATTCATGCCCTGATCCTTATTCTGCCTCACCTGCTTATCTCCCTGTCCCTCTTGAAGTCCAACATTGGCATAGACGAAAAAAATTGAAGACAGTAATAATAGCTGTGGTCTCTTCAGTCTCTGTTGTTCTCTGTTTGCTAGGAATAGTTTTGGTGGTTACTTTTGGAAGGAACAAGTTTGGTAGGCTCAGCAGCCTTCGAAGCAGACTACTGGTGACCTTTCAAGATGTTCCAATTGAACTCAGTTACGATAATGTTGTCACAGCCACAGGAAATTTTAGCCTCCAAAATCTAATTGGAACCGGTGGATTTGGGTCTACTTACAAGGCTGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGGTTGTCTATAGGTAAATTCCAAGGCATTCAACAGTTTGAGACAGAGATAAGAACCTTGGGGAGAATCCGACACAAAAACCTTGTCACTCTCATTGGCTACTATGTTGGAGAGGCTGAAATGTTCCTGATATACAACTACCTTTCAGGTGGGAACCTTGAAACCTTCATACACAACAATTCAGATAAAAGTATGTTGTGGCCAATTATCTATAAGATAGCAATAGACATAGCAGAGGCCGTAGCTTACCTTCATTATTCCTGTGTTCCTCGCATAGTTCATCGTGACATCAAGCCCAGCAACATCTTGCTTGATGAGGATTACAATGCCTACCTTTCAGATTTTGGATTGGCTAGACTCATGGAGGTATCTGAGACCCATGCCACAACTGATGTGGCAGGTACATTTGGGTATGTTGCGCCTGAATATGCCACCACTTGCAGGGTTTCCGACAAAGCAGATGTTTATAGCTTCGGTGTTGTGTTGCTAGAATTAATGTCAGGAAGGAAGTCACTTGATCCATCTTTTTCTGAATATGGAAATGGGTTCAATATTGTCCCGTGGGCTAAGTTGCTAATGACGGAAGGACGTTCTTCTGAACTGTTTTCACCTGCTCTGTGGGAATCAGGACCTGAGGAGAAACTGTTGGGGCTTTTAAAAGTTGCATTAATCTGCACAGTGGAGACGCTTTCTATTCGGCCGTCGATGAAACACGTTCTTGAGAAATTGAAACAGCTTAGAAGTTGA 3114 0.4322 MDLLFLACVFLFTAHCSEAIATSVPNDVLSLLSFKDSVSSESSGLLSGWSKESSESYCQWHGVTCENRLSGRVIALNLTGLRGGKLTPSIGDMSELRVLSLPHNVFSGEIPETLGKLRLLEVLELQGNNFSGRIPNQMSYLPSLRILNLSNNAFSGAIPGKLIGSGNVSVIDLSNNQLSGPIVDSFNTVVESLIHLKLSHNFLTGKIPSEIGKCRNLRTLLLDGNILEGNIPYEIGNMTELRLLDVSRNSFTGRIPKEIANCRKLSVLVLTDLLDDNASPDESLANSFRGEFNAFVGNIPPQLLLLSGLEILWAPRANLGGRLPRGWTDSCSLRVLNLAENYIVGGIPETLGMCRNLTFLDLSSNNFVGYLPSKHLQVPCMVYFNVSWNNLSGTLPGFGKESCDLSRTLGDVHVDILVWESLMDALGRSGSDGAVVINHDFSWNSFTGSLPLFSLVGTTDSKISYTLSLNNNKFSETLPYHLVSNCNDLKMLKVNLSVNQLSGGNSQELLLECLQLTEFEASFNQIEGSIDPHIGDYTMLQRLDLRGNKLTGPLPDQLGSLKKMKWMLLGGNNLTGEIPSQLGQLDSLVVVDLSHNALTGTIPASLTNATTLETLLLDHNQLNGEIPSSFSTLSSLVGFDVSFNNLSGHIPHLHHPSDCDYFKGNVHLHSCPDPYSASPAYLPVPLEVQHWHRRKKLKTVIIAVVSSVSVVLCLLGIVLVVTFGRNKFGRLSSLRSRLLVTFQDVPIELSYDNVVTATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLSIGKFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLETFIHNNSDKSMLWPIIYKIAIDIAEAVAYLHYSCVPRIVHRDIKPSNILLDEDYNAYLSDFGLARLMEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMTEGRSSELFSPALWESGPEEKLLGLLKVALICTVETLSIRPSMKHVLEKLKQLRS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2119 1037 FunFam Piriformospora indica-insensitive protein 2 188 276 - -
Alju04g2119 1037 ProSiteProfiles Protein kinase domain profile. 761 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2119 1037 Pfam Protein kinase domain 763 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2119 1037 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 725 836 - -
Alju04g2119 1037 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 216 1034 - -
Alju04g2119 1037 CDD STKc_IRAK 767 1035 - -
Alju04g2119 1037 FunFam Leucine-rich repeat receptor-like protein kinase 24 184 - -
Alju04g2119 1037 Gene3D Ribonuclease Inhibitor 22 81 IPR032675 -
Alju04g2119 1037 Gene3D Transferase(Phosphotransferase) domain 1 837 1036 - -
Alju04g2119 1037 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Alju04g2119 1037 SMART LRR_typ_2 190 214 IPR003591 -
Alju04g2119 1037 SMART LRR_typ_2 141 165 IPR003591 -
Alju04g2119 1037 SMART LRR_typ_2 238 262 IPR003591 -
Alju04g2119 1037 SMART LRR_typ_2 537 561 IPR003591 -
Alju04g2119 1037 SMART LRR_typ_2 585 609 IPR003591 -
Alju04g2119 1037 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 422 679 - -
Alju04g2119 1037 SUPERFAMILY Protein kinase-like (PK-like) 739 1032 IPR011009 -
Alju04g2119 1037 Pfam Leucine rich repeat 167 225 IPR001611 GO:0005515
Alju04g2119 1037 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Alju04g2119 1037 SUPERFAMILY RNI-like 77 394 - -
Alju04g2119 1037 ProSitePatterns Protein kinases ATP-binding region signature. 767 795 IPR017441 GO:0005524
Alju04g2119 1037 SMART serkin_6 761 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2119 1037 SUPERFAMILY L domain-like 295 656 - -
Alju04g2119 1037 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 837 1037 - -
Alju04g2119 1037 Gene3D Phosphorylase Kinase; domain 1 725 836 - -
Alju04g2119 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 881 893 IPR008271 GO:0004672|GO:0006468
Alju04g2119 1037 Gene3D Ribonuclease Inhibitor 82 277 IPR032675 -
Alju04g2119 1037 Gene3D Ribonuclease Inhibitor 283 416 IPR032675 -
Alju04g2119 1037 Gene3D Ribonuclease Inhibitor 436 667 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2119 Alju-ChrAlju04 52558820 52561933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2119 2 1036 Receptor kinase-like Gene Family AT3G02130 43.269 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Alju04g2119 Pkinase 1.6e-41 CL0016