Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2115 ATGGAGCTATCAGATTTGCAAGCCAACTCGTCCACTCATCACCGCCACCCCCATAACCAGAAGCAGCAGCAGGTTGCTTCGACGACGTCGTCTCAGGTTGTGGTCCCCACTTTCGATGGCAGGCCTTCCCCTTCTTCGTCTTCCTCTTCTTCTTCATCATCATTCATGGGCTCCATCTCCATCCAAGCTGGACTTTCTTCTTCTACGACGTCGTCTTCTTCATCATCGGCTTCGTCTTCTTCCGTTTCCTTATCCAATAATTCCTCCTCTGTTTCTGCTACTACTGCTCTACCTTCTGCTGCTTCTGGTTCTAATGCCTCTGCTTCTCCTCACCTCATTGATGCTTCCTTGGCTATCGCCACCAGATCTGACGTCCATCCGCCGTCTCGGCCTGGAGGAGTTGGGGATGCTGCGAAGAAGACTCAAATTCAGCAGCAATTGTCGATTTCTACGGCGGTGACGGCCGCGGCCAACCCGCCTAAGAGGTCCTCCAAGGATAGGCACACCAAGGTGGATGGACGTGGACGGAGAATTCGAATGCCGGCGACTTGTGCGGCTAGGGTTTTTCAATTGACGAGGGAATTGGGGCATAAGTCTGACGGGGAGACAATTGAATGGCTGCTGCAGCAGGCGGAGCCGGCGATCATCGCTGCTACTGGTACCGGTACGATCCCGGCGAATTTCTCGACGCTCAACGTGTCGCTTAGGAGTAGCGGGTCAACGATCTCGGCTCCGCCGTCAAAGTCCGCTCCGCATACGTTTCACGGCGCGTTGGCTCTCACTGCTCATGGTCATCATCATCCTTATGAAGAAGCTTTCCAACACACTGCTCTGTTAGGGTTTCACCCTCACCATCACCACCAACAGCAGCAGAATCAGCCTCATCTACTGACCGCCAACCAGATAGCAGAAGCGATTCCTGTAGGCGGAGGCGGAGGGGAGGGTGGCGGCGGTGACGCGCCCGATAACTATTTGAGAAAACGTTTCAGAGAAGATCTATTCAAAGAAGACAGCCAATCACAAAACGAGAGTGGAGGGAGCTCACCCAAGGCATTCAAGAACAATTTACAACAAATCCCGAAGCAACAGGAGGCAGCTGGATCTTCGGGCCTTCTTCGTCCGACCAACATACTACCCGCCACCGCTACCATGTGGGCGGTAGCACCAGCTCCAGCGAGTGGCGCAGGCAGTACAATCTGGATGTTACCTGTGAACGCCGGAGGCTCAGGTTCAGGTTCGTCGCCGGAGACCCAAATGTGGCAGTTTCCGACTGCACAATCTGGTTCTGGAAACAACACTGTACAAGCGCCTCTGCAATTCATGCCTAGGTTCAATCTTCCTGGGGGACTTGAATTTCAGGGAGGTGGAGGGAGAGGGGGTTCTCTGCAACTGGGTTCCATGATAATGCCCCATCAACATCATCAGCAACAACAACCATCTCAGCATCTCGGTTTGGGTATGTCTGAATCTAATCTAGGCATGTTGGCTGCTTTAAATGCCTATTCCAGAGCTGGTTTGAATATGAATTCTGAGGAACATCATCCATTGGAGCACCAACACCACCACCATCAGCAGCAGCAAGCAACAGATAGTGGAGAAGAAGGTCCTAATAGTTCTCAATGA 1623 0.5274 MELSDLQANSSTHHRHPHNQKQQQVASTTSSQVVVPTFDGRPSPSSSSSSSSSSFMGSISIQAGLSSSTTSSSSSSASSSSVSLSNNSSSVSATTALPSAASGSNASASPHLIDASLAIATRSDVHPPSRPGGVGDAAKKTQIQQQLSISTAVTAAANPPKRSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGALALTAHGHHHPYEEAFQHTALLGFHPHHHHQQQQNQPHLLTANQIAEAIPVGGGGGEGGGGDAPDNYLRKRFREDLFKEDSQSQNESGGSSPKAFKNNLQQIPKQQEAAGSSGLLRPTNILPATATMWAVAPAPASGAGSTIWMLPVNAGGSGSGSSPETQMWQFPTAQSGSGNNTVQAPLQFMPRFNLPGGLEFQGGGGRGGSLQLGSMIMPHQHHQQQQPSQHLGLGMSESNLGMLAALNAYSRAGLNMNSEEHHPLEHQHHHHQQQQATDSGEEGPNSSQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2115 540 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 73 503 IPR005333 GO:0003700
Alju04g2115 540 MobiDBLite consensus disorder prediction 21 108 - -
Alju04g2115 540 MobiDBLite consensus disorder prediction 139 158 - -
Alju04g2115 540 ProSiteProfiles TCP domain profile. 164 218 IPR017887 -
Alju04g2115 540 MobiDBLite consensus disorder prediction 1 108 - -
Alju04g2115 540 MobiDBLite consensus disorder prediction 515 540 - -
Alju04g2115 540 Pfam TCP family transcription factor 163 288 IPR017887 -
Alju04g2115 540 MobiDBLite consensus disorder prediction 123 176 - -
Alju04g2115 540 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2115 Alju-ChrAlju04 52502246 52503868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2115 161 491 TCP Transcription Factor Family AT1G35560 46.847 2.37e-68 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju04g2115 TCP 8.4e-38 No_clan