Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2105 ATGAATATTCCGGTGGCTTTCAAGCAAGAGGTGGTCTACAAGAAGTGCCTGCATAACCATGCAGCCTCCCTCGGCAAAGTCGCCAGAGATGGTTGCTACGAGTTCCTGCAACCCAACATCGATAGTGGCTCGCCGGAGGCCGCCTTGCTTTGTGCAGTTTGCAACTGCCACCGGAACTTTCACCGAAAACAAGTTTTCTATACTCCAATCATGACAGTTGACACCAAAACCTTCCCGCCGCAAACCCAGCAACAGCCTGACTTTCCGGTTGAAGCTACAATGGCTGCTGCTGGTACTGAGGAGAATGCCGACAAGGCTGTGGCGGTGGTGGTGGCGCCACCGCCACAGCAGCTGCAGCAGAGGAGGAAGAGGAAGGCGAGGACCAAGTTCACGGATGAGCAAGTGAGTCGACTGGAAAGTTTTGCCCAAAGGTTGGGGTGGAGGTCGAAGAGCGCCGGCAAGGAAGAGATCCTTAAATTTTGCTCGGAAATAGGAATCAGTCGCCGGAATTTTATTGTGTGGCTCAACAACAACCGGCGAAGACAGAATGCAAATCATCGCCAAGCCGATGATGATCTGCCTGATGATGAAAATTAA 597 0.5226 MNIPVAFKQEVVYKKCLHNHAASLGKVARDGCYEFLQPNIDSGSPEAALLCAVCNCHRNFHRKQVFYTPIMTVDTKTFPPQTQQQPDFPVEATMAAAGTEENADKAVAVVVAPPPQQLQQRRKRKARTKFTDEQVSRLESFAQRLGWRSKSAGKEEILKFCSEIGISRRNFIVWLNNNRRRQNANHRQADDDLPDDEN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2105 198 Gene3D - 114 185 - -
Alju04g2105 198 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 13 64 IPR006456 -
Alju04g2105 198 Pfam ZF-HD protein dimerisation region 11 64 IPR006456 -
Alju04g2105 198 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 180 - -
Alju04g2105 198 NCBIfam homeobox domain, ZF-HD class 123 179 IPR006455 -
Alju04g2105 198 ProSiteProfiles 'Homeobox' domain profile. 121 185 IPR001356 GO:0003677
Alju04g2105 198 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 13 64 IPR006456 -
Alju04g2105 198 SUPERFAMILY Homeodomain-like 116 182 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2105 Alju-ChrAlju04 52379552 52380148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2105 4 180 ZF-HD Transcription Factor Family AT2G02540 35.922 4.84e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju04g2105 ZF-HD_dimer 3.4e-21 No_clan