Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2103 ATGGCTCAACTTTCGTCTTTCATGTTCTTCTCCTTCGTCTTCGTCTTACCTCTTTCCTATGGGTACGATCCACTGGATCCCAATGGAAACATCACAGTCACATGGGATTTCATCGCTGATAATGGGGACACTTACGATGTGAGGGTATCGCTATACAACTGGCAACTATATCGACACGTGGAGAAGCCGGGTTGGAGGCTAAGTTGGGGATGGAGAGGTGATGAGGTGATATGGAGCATGTCAGGAGCAGAGGCAATAGAGCAAGGGAATTGTTCAAGGTTTAAGGGACAAAACAAGCCACATTGTTGTGAGAAGCAACCAACCATTATTGATCTTATGCCTGGCACACCTTATAACAAGCAAGTCCCCAATTGTTGTAAACAAGGCATCTTATCATCTCTCACTCAAGATCCCTTACAAATCACTTCCATGTTTCAGATGAATTATAATAAACCCTCTGTTCCAAACCCTGACAATGTCACCATGCCTACTAATTTTAGCCTTGGAATCCCCGGTTACTCTTGTAGTGAGCCTATTCAGGTCCCTCCTAGCAAGTTCACCACTAATGGTCGTCGTTGGATTGAAGTTCTTGAAACATGGAATGTGACTTGCGTATACTCTCAATTCTTATCATCACCAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGATAACATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCAGGATCAAGCTGTGTCAATTCTGATAATGCTCCTTCATTGTTGAAACTTCCACAAGATGATAGCACACAAGAGATAGAACCAGTGGTGAGGTGTTCAGAGCACATGTGTCCTATTAGGATTCACTGGCATGTGAAGCAGAGCTATACAAAGTATTGGAGGGTGAAGATCACAATTACAAATTATAACTTTGTCAAGAACTATTCACAGTGGAATCTTGTGCTCTTACACCCTAATTTGCAGAGTTTAACTCAAGTCTTCAGCTTCAACTACCAACCTCTCAGAATTTTTGGGGATATCAATGATACCGCGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGACACATGGGGAAAATGGGCATGTACAAACGGAGATTCTACTTGGCAAAGATGCTGGAATCTTCACCTTCAATGGAGGATGGGGTTTTCCCAGAACTGTTTTATTTAATGGAGATGAATGTGTTATGCCTAGTCCTGATAATTACCCAACCCTTCCCAATACTGCTTCTTTTCTCTCCTCTTCTTCTTTCTTGCTTTTCTTGTCTTTTGTCCTCTCAATATTGTTTCGATGA 1308 0.4235 MAQLSSFMFFSFVFVLPLSYGYDPLDPNGNITVTWDFIADNGDTYDVRVSLYNWQLYRHVEKPGWRLSWGWRGDEVIWSMSGAEAIEQGNCSRFKGQNKPHCCEKQPTIIDLMPGTPYNKQVPNCCKQGILSSLTQDPLQITSMFQMNYNKPSVPNPDNVTMPTNFSLGIPGYSCSEPIQVPPSKFTTNGRRWIEVLETWNVTCVYSQFLSSPAPKCCVSLSAFYSDNIVPCPKCSCNCQGLPGSSCVNSDNAPSLLKLPQDDSTQEIEPVVRCSEHMCPIRIHWHVKQSYTKYWRVKITITNYNFVKNYSQWNLVLLHPNLQSLTQVFSFNYQPLRIFGDINDTAMFWGIKYYNDMLLTHGENGHVQTEILLGKDAGIFTFNGGWGFPRTVLFNGDECVMPSPDNYPTLPNTASFLSSSSFLLFLSFVLSILFR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2103 435 Pfam COBRA-like protein 45 207 IPR006918 GO:0010215|GO:0016020
Alju04g2103 435 PIRSF COBRA 1 435 IPR006918 GO:0010215|GO:0016020
Alju04g2103 435 PANTHER PROTEIN COBRA 9 425 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2103 Alju-ChrAlju04 52358817 52362877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2103 5 435 COBRA Gene Family AT3G02210 50.112 1.75e-161 461