Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2100 ATGATGGCCAAACATACAAAGCTCCAGCTTATTACCTATTCACAAGAGATTGTAGACGGACAGCCAATTTTTGTTTCTTATTCAAATTGTTTTCCTGTTAAGGCTTCGAACTTTGAACCTGCAGGCCATGCCTTCCATTCAGCTGCCCTTAAACTTCTTGGTGTTGAGGAAGATAATGCAGATGGTGATGATAAGAAGGTGGTTGATGATAAGGAACAGATGCATTTTGCATCATGTGATTCTTATAGCACCAAGGGTAAAAAGAAATCTGGTGCTGGAGACAAGCAGCAAGATCACTATGAATTATTGGGTTTGGGGCATCTAAGGTATCTTGCTACGGAAGATCAAATCCGTAAAAGCTATCGTGAAACTGCCTTGAGGTATCACCCAGATAAACAGGCTGCCCTTCTTCTTGGTGAGGAGACTGAAGCTGCAAAACAGGCAAAGAAGGATGAAATAGAAAGTCATTTTAAGGCAATCCAAGAAGCATATGAAGTACTGATTGATCCGTTAAAGAGAAGAATATATGATTCTACTGATGAGTTTGATGATGAAATTCCCACTGATTGTTCTCCACAAGACTTCTTCAAAGTGTTTAGTCCTGCTTTTACGAGGAATGGACGGTGGTCACTGGAGGGATCGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCCCGAGACCATAGGAGGTGGATGGAAAGACAGAATGCAAAATTGTCAGAAAAAGCGAGGAAGGAAGAGTATACACGGATTCGTGCTCTTGTTGATAATGCTCATAAGAGAGACCCAATAATACTGAGGAGAAAGGAAGAGGAAAAGGCTGAGAAGAAAAGGAAAAAAGAGGCTAAGATTCTGGCCAAAAAATTGCAGGAAGGAGAAGTTGCTAGAATTGCAGAAGAGGAGAAGAGACAGAAAGAGGAGGAGGAGAGACAAGCTGCAGAAGCTGCTTTACAACAAAAGAAGAGAACACATGACATATCTGAGGATGATACAGAAAGTCTTTGCCTGTCACTTGATATTGAGAAGTTGAGGAGTTTGTGCCAAATGATTGAAGGAAAACCCATCTCAGAGCAAGCAGAAATTCTAAGAGATGCTCGTGGTTCTAAAAAAGATGTGGATGACAAGAAATCTGGGAAAACAGATAAAAAGGATTGTTCCACAAGTGCTAATGGTATTGCCTCACTAGGCAGCATCACCAATGAAAAGAAGGAAAAACCTTGA 1233 0.4104 MMAKHTKLQLITYSQEIVDGQPIFVSYSNCFPVKASNFEPAGHAFHSAALKLLGVEEDNADGDDKKVVDDKEQMHFASCDSYSTKGKKKSGAGDKQQDHYELLGLGHLRYLATEDQIRKSYRETALRYHPDKQAALLLGEETEAAKQAKKDEIESHFKAIQEAYEVLIDPLKRRIYDSTDEFDDEIPTDCSPQDFFKVFSPAFTRNGRWSLEGSEFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEEYTRIRALVDNAHKRDPIILRRKEEEKAEKKRKKEAKILAKKLQEGEVARIAEEEKRQKEEEERQAAEAALQQKKRTHDISEDDTESLCLSLDIEKLRSLCQMIEGKPISEQAEILRDARGSKKDVDDKKSGKTDKKDCSTSANGIASLGSITNEKKEKP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2100 410 Coils Coil 270 290 - -
Alju04g2100 410 CDD DnaJ 98 169 IPR001623 -
Alju04g2100 410 Coils Coil 293 327 - -
Alju04g2100 410 PRINTS DnaJ domain signature 121 136 IPR001623 -
Alju04g2100 410 PRINTS DnaJ domain signature 152 172 IPR001623 -
Alju04g2100 410 PRINTS DnaJ domain signature 50 68 IPR001623 -
Alju04g2100 410 ProSitePatterns Nt-dnaJ domain signature. 157 176 IPR018253 -
Alju04g2100 410 Gene3D DnaJ domain 81 192 IPR036869 -
Alju04g2100 410 MobiDBLite consensus disorder prediction 365 387 - -
Alju04g2100 410 Pfam DnaJ domain 98 177 IPR001623 -
Alju04g2100 410 SUPERFAMILY Chaperone J-domain 96 204 IPR036869 -
Alju04g2100 410 MobiDBLite consensus disorder prediction 300 335 - -
Alju04g2100 410 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 3 210 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Alju04g2100 410 MobiDBLite consensus disorder prediction 365 410 - -
Alju04g2100 410 ProSiteProfiles dnaJ domain profile. 98 180 IPR001623 -
Alju04g2100 410 SMART dnaj_3 97 172 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2100 Alju-ChrAlju04 52337969 52339366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2100 99 178 C2H2 Transcription Factor Family AT1G74250 41.250 5.83e-08 53.1