Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2098 ATGGCGTTCGGTAACCAGATGTTGCATTGGATCAGTTTATGGAGATTGGGATCTGAGAAACAACTAAAGAGAAATCTGGGGCATCATGAAAATGATATGAGTGATCTTCCCCAGAAGCCTCCGATCAAGGGAACAAAAGGCATAGAAGAATCAGTTTTCTTGCATGGGGACTTGGATCTACATATTATAGAAGCAAAAAATCTTCCAAATATGGATTTTCATACTGAAACCATGAGAAAATGTCTTACAGTAGGAAACAATTGTGCACCTCCCTTTGTGAAAGGACTCAAGACACACTCTGGAAAACATAAAATGATCACTAGTGATCCTTATGTCTCTGTCTCTCTAGCAGGAGCTACTGTAGTTCAAACTAGAGTCATATCTAATTGTGAAAACCCTGTGTGGGATGAACATTTTATTGTTCCAGTTGCTCACCCTGTTCAAAAAGTTGTGTTTCTCGTGAAAGATGATGATGCTTTTGGAGCTGAACTCATTGGAGTCGTGGAGATACCTGTTCAGAAGATTTTGCTGGGGAACACTGTTAATGATTGGTTTCCCATCATTGGCGAAGGAAACTGCTTAAAACCTTATCCTGAATTGCATATTTCTTTAAAGTTTGCACCTGTGGGAGGAGACAAGAATCAGGCAAGTCAGTTTGCTGTTCCTAATACATATTTCCCTCTCAGAAAAGGTGGGAGAGTGACTCTTTATCAAGATGCACATGTACCAAATGGTATCCTGCCTGAAATTCCACTTGAGGGTGGAAAAGTCTATAACCAAGGTAGATGTTGGGAGGATATATGCCATGCAATTTTGGAAGCTCACCATTTTATATATATTATAGGGTGGTCTATTTACCACCCTGTAAAGCTTGTCAGAGAACCAACAAAGCCGATGCCTGTTGGTGGAGAGCTTTCACTTGGAGAATTGTTGAAATACAAATCACAAGAAGGAGTCCGTGTGGTCATCTTGATTTGGGATGACCGAACATCGCATGATACCTTTTTTTTGAAAACGGAAGGTGTCATGCAGACACATGATGAAGCAACAAAAAAATTCTTTAAACACTCCACTGTCCAGTGCGTGCTATCTCCACGTTATCCAAGCAACAAGCTCAGTATTTTCAAGCAACATGTTGTGGGAACTCTTTTTACGCATCATCAGAAGTGTGTGCTTCTTGACACTCAAGCTTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGCCTAGATCTATGTGATGGCAGATATGATACCCCTGAGCATCGGCTCTTCACTGATCTTGATACTGTCTTCAGAGATGATTTCCATAATCCTATGCTTCCGTCCAGTTATACCAGTGGACCAAGAGAGCCATGGCATGACTTGCATTGCAAAGTTGAGGGCCCAGCTGCATATGATATATTAACTAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGTAACTTAAGGCTAAATAAGGTTACAAATTGGCATGATGATGCTTTGCTAAGGCTAGATCGAATATCATGGATTGTCACACCAGCTATTGGTGTTGATAAAGATACAAGTGTCTATGTAACTCAAGAAAAAGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATGCTATGGAAGCTAAGGCTCAGAATCTTATCTGTGGAAAAAATTTGAAAGTTGACAAAAGCATTCATGCTGCTTATGTATATGCAATAAGGTCAGCTCAACGCTTCATATATATAGAGAATCAATATTTTCTTGGATCCTCATTTCATTGGCCTACCTACAAAACTGCAGGTGCACATAACTTGATTCCTATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAATGCCCAAGAACGTTTTACTGTGTATATAGTAATCCCCATGTGGCCAGAAGGGCATCCGTCTAGCGCTCCTGTACAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAGGATTGTTGCAGATGCCCTTAAACAGGCAGGACTCGCTGACCGTTGTCACCCTCAAGATTATCTAAACTTTTATTGCCTTGGAAAGCGTGAGCCTCAAATATCTCAAAGTCCATCACCAGCATTTCATTCTGCTGAAAACCGTACTTTGGCATCGGTGAAAAAATTCAGACGGTTTATGATCTATGTTCACGCCAAAGGAATGATAGTTGATGATGAGTACGTCCTCATTGGATCTGCAAATATTAATGAGAGATCTTTGGATGGTTCGAGGGATACAGAAATTGCAATGGGAGCTTATCAACCAAAATACACAAAGAAAGCAAAGAAGGCTCGCCCACATGGCCAGGTGTATGGTTACAGAATGTCACTGTGGGCTGAGCATCTGGGTAGTGTTGAAGATACTTTTGATGAACCAGAGAGCCTGCAATGTGTGAGATATGTCAACAATGTTGCCAAACGGAACTGGACTGCATATGTATCTGACGATGCTGGGAACATGTGGGGACACTTGATGCAGTACCCAGTTCATATCAGTGCTGACGGGACTGTCAGTGCACTGCCAGATCATGAGACCTTTCCTGATGTTGGCGGTAAAATTCTTGGATCCCCCAACTCTCTTCCTGATGCACTAACCACATGA 2637 0.4152 MAFGNQMLHWISLWRLGSEKQLKRNLGHHENDMSDLPQKPPIKGTKGIEESVFLHGDLDLHIIEAKNLPNMDFHTETMRKCLTVGNNCAPPFVKGLKTHSGKHKMITSDPYVSVSLAGATVVQTRVISNCENPVWDEHFIVPVAHPVQKVVFLVKDDDAFGAELIGVVEIPVQKILLGNTVNDWFPIIGEGNCLKPYPELHISLKFAPVGGDKNQASQFAVPNTYFPLRKGGRVTLYQDAHVPNGILPEIPLEGGKVYNQGRCWEDICHAILEAHHFIYIIGWSIYHPVKLVREPTKPMPVGGELSLGELLKYKSQEGVRVVILIWDDRTSHDTFFLKTEGVMQTHDEATKKFFKHSTVQCVLSPRYPSNKLSIFKQHVVGTLFTHHQKCVLLDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFTDLDTVFRDDFHNPMLPSSYTSGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRNLRLNKVTNWHDDALLRLDRISWIVTPAIGVDKDTSVYVTQEKDPETWNVQVFRSIDSGSVKGFPKDAMEAKAQNLICGKNLKVDKSIHAAYVYAIRSAQRFIYIENQYFLGSSFHWPTYKTAGAHNLIPMELALKIASKINAQERFTVYIVIPMWPEGHPSSAPVQEILFWQGQTMSMMYRIVADALKQAGLADRCHPQDYLNFYCLGKREPQISQSPSPAFHSAENRTLASVKKFRRFMIYVHAKGMIVDDEYVLIGSANINERSLDGSRDTEIAMGAYQPKYTKKAKKARPHGQVYGYRMSLWAEHLGSVEDTFDEPESLQCVRYVNNVAKRNWTAYVSDDAGNMWGHLMQYPVHISADGTVSALPDHETFPDVGGKILGSPNSLPDALTT 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2098 878 ProSiteProfiles C2 domain profile. 38 185 IPR000008 -
Alju04g2098 878 PIRSF PLD_plant 43 878 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju04g2098 878 Gene3D C2 domain 55 220 IPR035892 -
Alju04g2098 878 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 209 IPR035892 -
Alju04g2098 878 Gene3D Endonuclease Chain A 253 500 - -
Alju04g2098 878 Pfam Phospholipase D Active site motif 725 751 IPR001736 GO:0003824
Alju04g2098 878 Pfam Phospholipase D Active site motif 383 417 IPR001736 GO:0003824
Alju04g2098 878 Gene3D Endonuclease Chain A 533 780 - -
Alju04g2098 878 CDD C2_plant_PLD 52 206 - -
Alju04g2098 878 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 382 417 IPR001736 GO:0003824
Alju04g2098 878 Pfam Phospholipase D C terminal 798 868 IPR024632 -
Alju04g2098 878 FunFam Phospholipase D delta 254 498 - -
Alju04g2098 878 Pfam C2 domain 56 187 IPR000008 -
Alju04g2098 878 PANTHER PHOSPHOLIPASE D 49 867 IPR015679 -
Alju04g2098 878 SUPERFAMILY Phospholipase D/nuclease 222 487 - -
Alju04g2098 878 SMART pld_4 724 751 IPR001736 GO:0003824
Alju04g2098 878 SMART pld_4 382 417 IPR001736 GO:0003824
Alju04g2098 878 SMART C2_3c 57 184 IPR000008 -
Alju04g2098 878 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 724 751 IPR001736 GO:0003824
Alju04g2098 878 SUPERFAMILY Phospholipase D/nuclease 572 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2098 Alju-ChrAlju04 52311631 52333681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2098 38 877 Phospholipase D Gene Family (Wang group) AT4G11850 53.497 0.0 907