Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2093 ATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCTAGGCTTATGCGCAACAAAGAGACCAAGGAGCTCGTTGCCATGAAGTACATTGAACGAGGCCCCAAGATTGATGCAAATGTGGCCAGGGAAATTATAAACCATAGATCTCTTCGCCATCCGAATATAATTCGTTTCAAGGAGGTGGTGCTGACTCCCACACATCTTGCAATAGTCATGGAGTATGCTGCAGGTGGAGAGCTCTTTGAGCGAATATGCAATGCTGGAAGATTCAGTGAAGATGAGGCTAGGTACTTCTTCCAGCAGCTCATCTCAGGAGTTAACTACTGTCATTCCATGCAAATTTGCCATCGAGACTTGAAGCTAGAGAACACCTTATTGGATGGCAGCCCAGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCAAGACCTAAGTCAACTGTTGGAACTCCGGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGACGTATGGTCTTGTGGGGTAACTCTTTATGTAATGCTAGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCCAGAAACTTCAGGAAAACCATAAACCGAATTATGTCAGTTCAATACAAGATCCCGGACTATGTTCACATATCTCAGGACTGTAGACACCTGCTATCTCGCATCTTTGTGGCAAATCCAGCAAGGAGAATTACCATCAAGGAGATCAAGTCCCACCCATGGTTTCTAAAGAACTTGCCAAGGGAATTGACAGAAGTGGCTCAAGCTGTTTACTACAGGAAAGGGAACCCAACCTTTTCTCTTCAGAGTGTAGAAGACATCACGAAGATTGTTGAGGAGGCCAAAACTCCTGCCCAAGTTTCAAGGTCAGTTGGCGGATTTGGCTGGGCAGGAGAGGAGGAGGAGGAAGAAGAAGCAAAAGATGGAGTTGCTGCTGGGGAGGTGGAGGAAGAAGAAGATGAATATGAAAAGCGAGTCAAGGAGGCACAGGCTAGTGGAGAATTTAGTGTCAGTTAA 1071 0.4566 MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGPKIDANVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPRNFRKTINRIMSVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKGNPTFSLQSVEDITKIVEEAKTPAQVSRSVGGFGWAGEEEEEEEAKDGVAAGEVEEEEDEYEKRVKEAQASGEFSVS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2093 356 Coils Coil 330 350 - -
Alju04g2093 356 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2093 356 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Alju04g2093 356 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Alju04g2093 356 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Alju04g2093 356 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Alju04g2093 356 MobiDBLite consensus disorder prediction 315 337 - -
Alju04g2093 356 PANTHER SERINE/THREONINE KINASE 2 299 - -
Alju04g2093 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Alju04g2093 356 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g2093 356 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Alju04g2093 356 CDD STKc_SnRK2 3 259 - -
Alju04g2093 356 MobiDBLite consensus disorder prediction 307 356 - -
Alju04g2093 356 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Alju04g2093 356 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2093 Alju-ChrAlju04 52228132 52231965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2093 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 44.074 3.95e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Alju04g2093 Pkinase 6e-72 CL0016