Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2087 ATGGCTAACGATACGGCAATGGAGCTTCCTCCTCGCGACGATTGCTGTCCTGTTTGCCACGGCGATTTCAGCCTCCCATGCCGCACTTCCTGCTCCCACTGGTTCTGCGGAGAGTGCATACTGCGTGTATGGCTACACGGAGATGCATCAAAGCAATGCAAATGCCCAATGTGCTGTCGTCATTTTTCCAGTCTAGCACCCTTTCAAGCAGCATTTGACTGTAGCCAGAACCCAGAATCAACTAAGATCATGGAAAATGTGAGAAGGTACAACAGGTTGCACATTGGGGGCATGCAAGGTCTCATGCAGAAACTTTTTGATCTCCCATTTCTTGTTCGGATGGCTCTCCAAGATATGATGGATCCTGATAAAACAAGTTCTTACTTGACTAGAGTTCGCCTCTTTGCAATGATACTTGGCATGATGTATGTGGTCAACCCATTCGAATTTCTCCCATTCGCTAAGCGAGACATATTAAATTTGTTTGATCTCTATGCAACTACATTTGTAACTATCATCCACATCATCGCGCTGTGCCGTTCAAGGCGTGTAGCCAGGCAATGA 564 0.4663 MANDTAMELPPRDDCCPVCHGDFSLPCRTSCSHWFCGECILRVWLHGDASKQCKCPMCCRHFSSLAPFQAAFDCSQNPESTKIMENVRRYNRLHIGGMQGLMQKLFDLPFLVRMALQDMMDPDKTSSYLTRVRLFAMILGMMYVVNPFEFLPFAKRDILNLFDLYATTFVTIIHIIALCRSRRVARQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2087 187 SUPERFAMILY RING/U-box 7 63 - -
Alju04g2087 187 SMART ring_2 16 58 IPR001841 -
Alju04g2087 187 PANTHER UNCHARACTERIZED 5 185 IPR038896 GO:0061630
Alju04g2087 187 ProSiteProfiles Zinc finger RING-type profile. 16 58 IPR001841 -
Alju04g2087 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Alju04g2087 187 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
Alju04g2087 187 Pfam Zinc finger, C3HC4 type (RING finger) 16 58 IPR018957 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2087 8 137 C3H Transcription Factor Family AT4G33940 46.923 4.98e-45 145