Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2081 ATGGAGAAGAAGGATTCAGGGGGAAGCTTGAAGAAAGAAAATGAAGAGAAGAAAGATGAAGATTTGGAAGAGCAGCCTCATCTGGAAGAAGACTATGAATCTCCAACTTTCAATCTTCAAAACGTTTCAAAAGTCATTCTTCCTCCTTTGGGTGCTTCCAGTTATAATGATCACAACTCATCACCTAACTCCAAAACATGGATCATATCCCCAATGGATACCAGATACAGGTGTTGGGAGAGTTTGATGGTGGTGCTGGTGGGATATTCAGCATGGGTGTATCCCTTTGAAATAGGGTTTTTGATGTCTTATCCACAGCATAAACTCTACATAGTGGATAATTCCATTGATCTCTTCTTTGCCATTGACATCGTTCTCACTTTCTTCCTTGCTTACATTGACCGTTCCACTCAACTTCTTGTTCGACATCCCAAACAAATTGCTCTCAGGTACGTATCAACATGGTTTGTGATGGATGTGGCATCAACCATTCCATATGAGGCATTGGGTTATTTGTTCACAGGCAAACACAAAGTGGGCCTTACCTTCTTCCTCTTGGGCATGCTTAGGCTTTGGAGGCTTCGAAGAGTCAAGCAATACTTCACCAGGCTTGAGAAAGACATCAGATTCAGCTATTTTTTGATCAGATGTGTTAGACTTCTATGTGTAACATTTTTTATAGCACACTGTGGAGGGTGTCTGTACTATCTACTAGCAGACGTGTACCCTCACTTAGGGAGGACATGGATTGGGACAATAAATCCAAGTTTCAAAGAGACAAACATTTGGATTAGATACATATCAGCCATGTATTGGTCTCTCACCACCATGACCACTGTAGGCTATGGTGACTTCCATGCTGTGAATCCCATGGAGATGGCCTTCACCATTTGTTACATGCTCTTCAATCTTGGCCTCACTGCTTACTTGATTGGCAATATGACCAATCTTGTTGTCCAAGGAACTTGTCGTACCATGGAATTCAGAAACAACATTGAAGCAGCAACAAATTTTGTGAGCAGAAATAGAGTATCTGCGAGGCTAAAAGAGCAAATCATTGCTTATATGTGCTTAAGATACAAGGCAGAGAGTTTAAACCACCATCAGCTTATGGAACAACTTCCCAAATCAATACGCAAAAACATTTGTCAACACTTGTTCCTTCCTGCTGCACAAAAAGTTTATCTTTTTAAAGGGCTCTCCAGAGAAATCTTGTTGTCCTTGGCTGCAAAAATGAAGGCTGAGTATATACCTCCAAAAGAAGAAGTGATCATGCAAGGTGAAGCAGCAGAGGATGTTTACATAGTAGTGTCAGGAGAAGTGGAGATCATTGATTGTGTGATGAACAAAGAGAAAGTTTTAGGGATTTTACAAACATGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAAGCCTCAAAGCTTTACTTACAGAACCAAGATCCTCACACAGCTCTTGAGGCTCAAAACCAGTGATTTTACTGACATTATGCAGATTAGAAAAGATGACAATATACAAATGCTCAAAAATTTCCTTCAGCACTTGAAGAAGCTACATGATCTAAATGCCAAAGAGTTGGTGATTGATCGGAGCAGAGAAGATGACCCAAATATGGCTGTGAACTTGTTACATGTGGCCTCAACTGGCAATTCTGCTTTTCTTGAAGAGCTTTTGAAGGCAGGCTTGGATTCTAGTGTTGCAGACTCCAAAGGCAAAACCCCATTGCACATAGCAGCATTAAATGGCCACGAAGAGTGTGTAAAAGTGTTACTTAAGCATGCATGCAACGTACATGCAAGAGACATGAATGGGAGCACAGCACTATGGGACGCCATAGTTTCAAAGCATTACTCAATATTCAGAATCCTGTACCAGCTTTGTGTGCAGTCTGATCCACACACAGCAGGTGATCTTCTTTGTAAAGCAGCAAAGAGGAATGAGCTAACAGTGATGAGTGAGCTTTTAAAGCAAGGCTTGAACATAGAGTCCAAAGACCACCATGGTTGTACGGCAATACAAGTTGCCTTGCAACACAATCATGTGGACATGATTCAATTGCTTTTCACGCACGGCTCAGATGATGTTGGTGCTCTTAATTATAATAATAACCAAGAAGAAGAAGGGCAACACAACAATATTTGGGGAACATATAATAATAATAATAGTAGTAATAATCATAGGCAAATTGCTTCAAGAGTTAGCATATTTAGAGGTCATCCTATATTGAGAAGACAACAAGGTTGCATTGAAGCTGGCAAGATGATAAGGTTCCCTAACTCAATAGAGGAGCTCAAGACCGTTGCAGGTGAAAGATTTGGGTTTGATGCAAAAGATGCAATGGTGACTGATGAAGGAGGAGCAGAAATAGATTCTATTGATTTGATCAGAGATAATGATAAACTTTTTATTATTGATTAG 2421 0.4036 MEKKDSGGSLKKENEEKKDEDLEEQPHLEEDYESPTFNLQNVSKVILPPLGASSYNDHNSSPNSKTWIISPMDTRYRCWESLMVVLVGYSAWVYPFEIGFLMSYPQHKLYIVDNSIDLFFAIDIVLTFFLAYIDRSTQLLVRHPKQIALRYVSTWFVMDVASTIPYEALGYLFTGKHKVGLTFFLLGMLRLWRLRRVKQYFTRLEKDIRFSYFLIRCVRLLCVTFFIAHCGGCLYYLLADVYPHLGRTWIGTINPSFKETNIWIRYISAMYWSLTTMTTVGYGDFHAVNPMEMAFTICYMLFNLGLTAYLIGNMTNLVVQGTCRTMEFRNNIEAATNFVSRNRVSARLKEQIIAYMCLRYKAESLNHHQLMEQLPKSIRKNICQHLFLPAAQKVYLFKGLSREILLSLAAKMKAEYIPPKEEVIMQGEAAEDVYIVVSGEVEIIDCVMNKEKVLGILQTWDMFGEVGALCCKPQSFTYRTKILTQLLRLKTSDFTDIMQIRKDDNIQMLKNFLQHLKKLHDLNAKELVIDRSREDDPNMAVNLLHVASTGNSAFLEELLKAGLDSSVADSKGKTPLHIAALNGHEECVKVLLKHACNVHARDMNGSTALWDAIVSKHYSIFRILYQLCVQSDPHTAGDLLCKAAKRNELTVMSELLKQGLNIESKDHHGCTAIQVALQHNHVDMIQLLFTHGSDDVGALNYNNNQEEEGQHNNIWGTYNNNNSSNNHRQIASRVSIFRGHPILRRQQGCIEAGKMIRFPNSIEELKTVAGERFGFDAKDAMVTDEGGAEIDSIDLIRDNDKLFIID 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2081 806 PRINTS EAG/ELK/ERG potassium channel family signature 266 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju04g2081 806 PRINTS EAG/ELK/ERG potassium channel family signature 310 319 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju04g2081 806 PRINTS EAG/ELK/ERG potassium channel family signature 113 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju04g2081 806 PRINTS EAG/ELK/ERG potassium channel family signature 292 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju04g2081 806 PRINTS EAG/ELK/ERG potassium channel family signature 124 133 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju04g2081 806 SMART ANK_2a 604 635 IPR002110 GO:0005515
Alju04g2081 806 SMART ANK_2a 571 600 IPR002110 GO:0005515
Alju04g2081 806 SMART ANK_2a 668 698 IPR002110 GO:0005515
Alju04g2081 806 SMART ANK_2a 539 567 IPR002110 GO:0005515
Alju04g2081 806 Pfam Ankyrin repeats (3 copies) 544 626 IPR002110 GO:0005515
Alju04g2081 806 SUPERFAMILY cAMP-binding domain-like 324 516 IPR018490 -
Alju04g2081 806 PRINTS Ankyrin repeat signature 572 587 IPR002110 GO:0005515
Alju04g2081 806 PRINTS Ankyrin repeat signature 651 665 IPR002110 GO:0005515
Alju04g2081 806 ProSiteProfiles KHA domain profile. 733 806 IPR021789 -
Alju04g2081 806 Gene3D Helix hairpin bin 323 387 - -
Alju04g2081 806 ProSiteProfiles Ankyrin repeat profile. 668 694 IPR002110 GO:0005515
Alju04g2081 806 MobiDBLite consensus disorder prediction 1 24 - -
Alju04g2081 806 Gene3D - 532 632 IPR036770 -
Alju04g2081 806 Gene3D Jelly Rolls 392 525 IPR014710 -
Alju04g2081 806 ProSiteProfiles Ankyrin repeat region circular profile. 571 602 - -
Alju04g2081 806 MobiDBLite consensus disorder prediction 1 33 - -
Alju04g2081 806 ProSiteProfiles cAMP/cGMP binding motif profile. 396 515 IPR000595 -
Alju04g2081 806 CDD CAP_ED 396 509 IPR000595 -
Alju04g2081 806 FunFam Potassium channel KAT2 384 520 - -
Alju04g2081 806 ProSiteProfiles Ankyrin repeat profile. 571 603 IPR002110 GO:0005515
Alju04g2081 806 FunFam Potassium channel KAT3 78 320 - -
Alju04g2081 806 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 423 439 IPR018488 -
Alju04g2081 806 PANTHER POTASSIUM CHANNEL AKT1 39 804 IPR045319 GO:0005249|GO:0006813
Alju04g2081 806 SMART cnmp_10 396 513 IPR000595 -
Alju04g2081 806 SUPERFAMILY Ankyrin repeat 500 702 IPR036770 -
Alju04g2081 806 Pfam KHA, dimerisation domain of potassium ion channel 733 804 IPR021789 -
Alju04g2081 806 SUPERFAMILY Voltage-gated potassium channels 71 319 - -
Alju04g2081 806 Gene3D - 633 711 IPR036770 -
Alju04g2081 806 ProSiteProfiles Ankyrin repeat region circular profile. 668 694 - -
Alju04g2081 806 Gene3D - 77 320 - -
Alju04g2081 806 Pfam Ion transport protein 77 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju04g2081 806 Pfam Cyclic nucleotide-binding domain 416 499 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2081 Alju-ChrAlju04 52126423 52136346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2081 29 576 Ion Channels AT4G22200 66.486 0.0 769