Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2075 ATGGCGAATCTCACTATCAGCTCTCAAATTTGCATAAGAATCGTTCTTGCTTTTCTCCAGTTCCTTTCATCCGTTCAAGAAGCGAACAAGGAAGAGAAAGAGCGAATTAAGAGTGTGGCCAAAAGTTTGAAGGAGATCTTCAAGATTAATCAAGAAATGGTGGAGGATAATGATCAGAAAATTACAAGGCCTGGTATTCTTGTAACTTTGTTTTGCACTCCTCAAGATGATACTGAAGATTTTGAGGACTCTGACGATGAACCTTGTAGCTCCACTACTTCAACTGCCAGAAAACGCACTTCATCTTCCAAAGTGGCAGTGGGTCGGAACATGGTGAACTTCAGCAAAGAATTCAAACAAGCAGTGTTAAAATATGGAGGTCTCGAGTCTCTGTTTGGTCACAGCAGCAACCCAAAAAAGAGAATCAACAGTACTATTGGGAAGATTTTCAATGAAGCTCTAGGAGTGATTAGAAAAGAAGGGCCTTTCAGATTTAACATGAAGGACGTCGCTGAGGCCCTCAAAACACTGGGAAACAAGGCCATGGAAACTAATTGTTATGCTAAAGCTGCTGAATTTTACAGTTGTGCTATTGCAATTACCCTCGACAATGCTGTCTACTATTGCAATAGAGGGGCAGCATTGATAAAGATTGGGAGGTTTCATGAAGCTGTTGGTGACTGTTGTACGGCAATTAGCCTAAACTCTAGCTACATGAAAGCTTACTATCGCTTAGGCTTAGCATACAGTGAACAAGGAAAATACTTCGATGCTATATTTGAGGGCTTTATAAGAGTTTTGCAGCTAGATCCCAGAAACAAACCTGCCTTGACCCAACTTGAGATAGTGGAAGGCAAGCTGAGTGATCAACTTTCATGGTTGGACGATCAGCTTGAAGATCTGAGGAAAAAGGGTTTGATTACTCGATGCCGAAAAGTGGGAATCAAGGAAGGGACAGCATTAGTGTATCAAGGGAAAGCAGAAGATGGCGAGTCTGACAAATTCGTGTTGGTCGAAGAAGATTTTGATCCTTCCGAAATCGAAGAGACCATGAGTATTGCAGAATTTATCGATCTCTTCTCTGGTGCCAACATAGCTCCATAA 1104 0.4167 MANLTISSQICIRIVLAFLQFLSSVQEANKEEKERIKSVAKSLKEIFKINQEMVEDNDQKITRPGILVTLFCTPQDDTEDFEDSDDEPCSSTTSTARKRTSSSKVAVGRNMVNFSKEFKQAVLKYGGLESLFGHSSNPKKRINSTIGKIFNEALGVIRKEGPFRFNMKDVAEALKTLGNKAMETNCYAKAAEFYSCAIAITLDNAVYYCNRGAALIKIGRFHEAVGDCCTAISLNSSYMKAYYRLGLAYSEQGKYFDAIFEGFIRVLQLDPRNKPALTQLEIVEGKLSDQLSWLDDQLEDLRKKGLITRCRKVGIKEGTALVYQGKAEDGESDKFVLVEEDFDPSEIEETMSIAEFIDLFSGANIAP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2075 367 SUPERFAMILY TPR-like 169 289 IPR011990 GO:0005515
Alju04g2075 367 MobiDBLite consensus disorder prediction 78 102 - -
Alju04g2075 367 SMART tpr_5 205 238 IPR019734 GO:0005515
Alju04g2075 367 SMART tpr_5 239 273 IPR019734 GO:0005515
Alju04g2075 367 SMART tpr_5 171 204 IPR019734 GO:0005515
Alju04g2075 367 PANTHER LD24721P 1 290 IPR047150 -
Alju04g2075 367 Gene3D Tetratricopeptide repeat domain 166 302 IPR011990 GO:0005515
Alju04g2075 367 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2075 Alju-ChrAlju04 52012994 52017706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2075 170 288 U-box Gene Family AT3G07370 29.412 9.69e-07 48.1