LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g2045	ATGCAATCCGCCAAACAAGCAGCTCTCTACTCTCACTCCAGCCCCCTCTCCGATGCTATTCCTGGTTTTCGCTTCCAAACTCACATCTTCTTATTAATCATTCACAGCTTCAACAAAATGGACGCCGCCAAGCGCAAGCGCTTGAAGCCCAAGCTCGAGCGCCGAAATGCCAGGAAGAACATCGATTATCAAGTTCCTGATTCTTTAGCTTCCTCTTTCGACGGTTCCTCCTCGCCGGATTTTCAATCTACCTCATCCCTCGATCTTTCCCCTTCCCTCGAGAAACAAACCAGCATTCGTGTTCAGGGCGTCGACGGTGAATTCGAATTGATTTTCCGCAGCCTCGGGCTTTCTGGCCCTGACGACTTCGCCATTCCTCTTGCTGATTGGGAAGCTCAAAGGTATCGCTATAATTTGAGTGCTAAATCGCCGGAAAAGAAGGTGGAGGATGAGAAATCGGTGAAACTTGAATCTAGGGTTTCAATTAAAAGTGATATTGAAGTGCATCGTGATGAAGGGCAGCTCGGGAAGAGTTTTGTTCCTTCTGATTCGAAGCCCCTTGGTGGTGGGGGAATCAAGGGTGCCAGGCCTCCCGTCCTCTCAACGCCGCCGGTGAAGCTGCCGCCTATGGTTGATGACGGTAGATCTACTTGGGATTTAGTGAGGTCTTTATCAGATGGTGTTATTGATAACGATTCACCCATTTGTGATGCGGGAATCAGCTCTCCCGGTGAAGAAGACGAAGGGCGTGGCCAGGAAAATGAAGGGTGTGATCAAGGAATTGGCGGTGAGGAAGAACCACATAGTGCGAGACATGGGGAAAGCAATCTTCTTTCAGATTCTTGTTCATCTACGTCCCGCGAGGACGAAGAAAGTGATGCCGTTGGTTTTAAGGTTTCTGGTGAGGCTGACGAATCGTTTTTCAATGTCTCTCCACATGGTTCAGTTAGACGCATTTTTAAGTCTTGGCAAAAGGGTGAGATTTTGGGGAAGGGATCATTCGGAACGGTGTATGAAGGCTTCACAGATGATGGATTCTTTTTTGCCGTAAAGGAAGTGTCTTTGCTAGATCAAGGAGCCCAAGGAAAACAGAGTATTTTCCAACTTCAGCAGGAAATATATCTTTTGAGTCAATTTGAACATGATAACATTGTTCGATATCTTGGGACTGACAAGGATAAAAATATGCTATACATCTTCCTTGAGCTTGTAACCAAAGGGTCATTGGCAAGACTCTATCAAAAGTATCGTCTAAGGGACCCTCAAGTTTCTTCATACACGCGGCAGATTTTAAGTGGTTTAAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGCGCTAATATATTGGTTGATACAAATGGGTCAGTAAAGCTCGCTGATTTTGGGCTAGCCAAGGCAACCACTAGGAATGATGTTAAATCAAGCAAAGGTTCCCCATATTGGATGGCCCCTGAGGTTGTAAATCTAAGAAGCCGTGGTTATGGCCTAGCTGCTGATATCTGGAGCTTGGGATGCACAGTTTTGGAAATGTTGACGTGCCAGCCTCCATACTCTCATTTGGAAGGGATGCAAGCTTTATTTCGGATTGGCAGAGGTGAACCCCCACCTGTTCCAGAATCTTTATCAAAAGATGCCCGAGACTTCATTCTCAAGTGCCTGCATGTTGACCCTAATAAAAGGCCAACTGCAGTACAGTTATTGGATCATCCATTTTTAAAGAGGCCATTTCTATCTCCTATGAGTCCTGCTTCTCCGCATATCAGCAACTTACGGTTTTGA	1791	0.4595	MQSAKQAALYSHSSPLSDAIPGFRFQTHIFLLIIHSFNKMDAAKRKRLKPKLERRNARKNIDYQVPDSLASSFDGSSSPDFQSTSSLDLSPSLEKQTSIRVQGVDGEFELIFRSLGLSGPDDFAIPLADWEAQRYRYNLSAKSPEKKVEDEKSVKLESRVSIKSDIEVHRDEGQLGKSFVPSDSKPLGGGGIKGARPPVLSTPPVKLPPMVDDGRSTWDLVRSLSDGVIDNDSPICDAGISSPGEEDEGRGQENEGCDQGIGGEEEPHSARHGESNLLSDSCSSTSREDEESDAVGFKVSGEADESFFNVSPHGSVRRIFKSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDQGAQGKQSIFQLQQEIYLLSQFEHDNIVRYLGTDKDKNMLYIFLELVTKGSLARLYQKYRLRDPQVSSYTRQILSGLKYLHDRNVVHRDIKCANILVDTNGSVKLADFGLAKATTRNDVKSSKGSPYWMAPEVVNLRSRGYGLAADIWSLGCTVLEMLTCQPPYSHLEGMQALFRIGRGEPPPVPESLSKDARDFILKCLHVDPNKRPTAVQLLDHPFLKRPFLSPMSPASPHISNLRF	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g2045	596	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	90	580	-	-
	Alju04g2045	596	SMART	serkin_6	323	576	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g2045	596	ProSiteProfiles	Protein kinase domain profile.	323	576	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g2045	596	MobiDBLite	consensus disorder prediction	175	211	-	-
	Alju04g2045	596	FunFam	Mitogen-activated protein kinase 1, putative, expressed	321	589	-	-
	Alju04g2045	596	SUPERFAMILY	Protein kinase-like (PK-like)	310	590	IPR011009	-
	Alju04g2045	596	MobiDBLite	consensus disorder prediction	231	294	-	-
	Alju04g2045	596	Gene3D	Transferase(Phosphotransferase) domain 1	321	590	-	-
	Alju04g2045	596	Pfam	Protein kinase domain	324	576	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g2045	596	MobiDBLite	consensus disorder prediction	70	89	-	-
	Alju04g2045	596	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	442	454	IPR008271	GO:0004672\|GO:0006468
	Alju04g2045	596	ProSitePatterns	Protein kinases ATP-binding region signature.	329	351	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g2045	Alju-ChrAlju04	51620755	51624802	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g2045	51	580	MAP Kinase Kinase Kinase	AT4G08500	46.050	1.66e-143	427

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Alju04g2045		Pkinase	2.1e-70	CL0016