Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2044 ATGAGAAGAGAGAAAGGAGAAGAAGTTGCAGAGATGGGAATTGATCTCTCTTTGAAGATTAATGCTAAACAAAAAGAGATAGAAGAAAAGGAGAGAGAAAGAATAATATTATTTGATGATTATGAGAAGGGAAAGAAGGATAATAAAGAAGAAGAAGCAACTGAGCAGATCACAGAAGGTGAAATTGAAGAAGACGATGCATCAGTTGAACAAAACTTAGCTTCCAGCACAAAGGAGCTAAGGGGGTTAAAAATGGAGATGGATCGTATGAAAGAGGAAAACAAAGTGTTGAGGAGAGTAGTGGAGCAAACCATGAAAGACTATTACGATCTCCAATTCAAATTCGCAGCCATCCATACTAATCCTCTCAACAACAATATTAAGCTCATGAACAAGGATCCTCAAATCTATCTCTCACTTCAAGGAAACAGTAATAATAATATGGCAAACACGAGCATGATGAGAATTGAAGAAGAAGGACCACCAGTAGCACCGACAAACACTGATATTAGTGAGAATGATTTGGGATTATCACTGAGGTTGCACACTACTACTAGTACATCAGAAGATGAAGATGATGGAGGCAATTTTCATAATATTAATAATAATAATAATCACAAACAAGATTTGGCTTCTTCTTCTTCTAAGTTGAATCGGATTCATCGTCATCAACATCAACATGTTGCAGCGTCGTCTCCTCCAAATAGAAAGGCTAGGGTTTGTGTTAGAGCAAGATGTGACACTGCCACTATGAATGATGGGTGCCAGTGGAGAAAATATGGGCAAAAGATTGCTAAAGGAAATCCATGTCCTCGTGCTTATTATCGATGTACCGTAGCTCCTGGATGCCCTGTAAGAAAACAGGTACAAAGATGTATAGAGGACATGTCAATCCTAATAACAACGTACGAAGGAACACATAATCATCCTCTACCTGTAGGAGCAACAGCCATGGCTTCTACTGCTTCCACGTCAGCAGCTTCCTTCATGTTACTTCACTCTTCTTCATCACAACCCTCCACCATTATTCCTACCTCTACTTTCATCCCTTTCAATAACAACACTACTAGTTATATCAGAACCCTGCACCCTAATAATAATAATCTTCCTCCTTCTAAACGTGCCCTTTTCTTTGATCTCACAAACAAAACTGCATTTCCTTAG 1164 0.3875 MRREKGEEVAEMGIDLSLKINAKQKEIEEKERERIILFDDYEKGKKDNKEEEATEQITEGEIEEDDASVEQNLASSTKELRGLKMEMDRMKEENKVLRRVVEQTMKDYYDLQFKFAAIHTNPLNNNIKLMNKDPQIYLSLQGNSNNNMANTSMMRIEEEGPPVAPTNTDISENDLGLSLRLHTTTSTSEDEDDGGNFHNINNNNNHKQDLASSSSKLNRIHRHQHQHVAASSPPNRKARVCVRARCDTATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDMSILITTYEGTHNHPLPVGATAMASTASTSAASFMLLHSSSSQPSTIIPTSTFIPFNNNTTSYIRTLHPNNNNLPPSKRALFFDLTNKTAFP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2044 387 MobiDBLite consensus disorder prediction 184 236 - -
Alju04g2044 387 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 359 IPR044810 GO:0003700
Alju04g2044 387 SUPERFAMILY WRKY DNA-binding domain 244 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g2044 387 FunFam probable WRKY transcription factor 31 236 313 - -
Alju04g2044 387 MobiDBLite consensus disorder prediction 43 68 - -
Alju04g2044 387 MobiDBLite consensus disorder prediction 197 217 - -
Alju04g2044 387 Coils Coil 73 107 - -
Alju04g2044 387 Gene3D WRKY domain 236 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g2044 387 Pfam WRKY DNA -binding domain 252 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g2044 387 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g2044 387 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2044 Alju-ChrAlju04 51575344 51578166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2044 12 370 WRKY Transcription Factor Family AT1G68150 44.205 5.71e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju04g2044 WRKY 1.4e-24 CL0274