Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2019 ATGAACGTCTTGTGCATAAAATTTTCCTTCACTTGCTTCTGTTCTTGTGTTGATAGTGCAGACTTGATGGCAGATAGCGTAGTTAGTTTTGTGCTGGAGAACTTGTCTCGGCTTGTGACAAACGAAGCCAATTTGCTATGTGGTGTGGAGGACAAAGTGAAGTTCCTTGAGAGTCACCTCGGAATGATGAGTGTCTTCCTTGAGAGCTGCGAACAAAACCAGCGGAAGAAGCCAATCGAACAAGAGATTGTACGTCAAATCAAAGACATCGCACATGAAGCTGAGGATGTCATCGACACTTTTGTTGTCAATGTTGCCAACTACCGAAGAAGAAGTCAGTTGTCCAGGATCCTCCATGGTGCTAGCCACGCAAAGCTGCGACGTCATGTTGCGAAGGAAATCGACAACATTAACGCCAGACTCAATTACCTCCATGAGAACAAAATAAAATATGACAACACCCAGGATGCAGCAAGATCTTCAACAGATCAGGAGTTACAACTAGTGCGCAAGCGAAGAAGAGACGTGGAGGAAGATGACGTGGTGGGTTTTCAGCAAGACACAGCTGAAGTAATCAATCGCCTCAAGGAAGGGGGTTCGCGTCGTGATGTGGTGTCCATCATTGGCATGGGGGGATTAGGTAAAACTACTCTTGCTCGCAATATTTATATTAGTGATGATGTCAAGGGTTACTTTGAGTGTCGAGCTTGGGTTTCTGTGTCTAATGACTACAGACCCAGAGAGATCTTGCACGCCCTTCTTAAATGCTTGATGTCAATTTCTGCAAATACATGCTATGACATTAACAATAGCAGTAGCAAGGAAAATAAGAAATCAGAGGGCGAAGGCAAAGCTGAATCTGATGGTTTTTATAGCTTGAGCGAGCAGGACCTGAAAGACAAGGTGCGAGGGTGTTTAAAAGGGAAGAGGTATCTTATAGTGTTGGATGACATATGGAAACCTCAACATTGGGATGACATACAATCTGCTTTCCCAGATGACAATATAAGCAGTAGAATCTTGATTACTAGCCGTTTGGGAGAGGTGGCTTCTCGTGCTAGTTCATCTCCTCCCTTCTATCTTCCTTTTCTTAGTGAAGAAGAGAGTTGGGAGCTTTTCTCAAAGAGGGTGTTTCGAGGAGAAGACATGCCTTCTGAGCTAGAGTTATTAGGTAAGCGCATGGTAAAAAGTTGTGGTGGCTTGCCAATATCCATCGTGGTGCTTGCAGGAATTCTAGCAAACAAGGAGAAGTCATACAGAGTTTGGTCCCAGATCATGGGCCATGTCAATTCGTATCTCACCAGACCAGAGACACAAGTACATGACATAGTACTGAAACTCAGTTATGATAGCTTGCCTCAAAGATTGAAGCCATGCTTTCTCTATTTTGGTATGTTTCCTGAAGACTATGAGATTCCTGTCAGACGCTTGATCCACCTATGGGTTGCGGAAGGATTTATTCTTCATAGTGATTCTAGAATTGTAGAAGATGTTGCAGAGGACTATTTGGATGAGCTCATTGATCGTAGCTTAATCCAAGAGGGTAGAAGAAGAAAGGATGGGGGAATCAAGACATGCCGTATCCATGATCTTCTGAGAGAACTTTGCATATTTGAGGGCAAGAAGCATAAGGTTTTTGAAGTTTGTAGAGATGGAGACATTAATTGGGAGCAAACCAGAGCTCGTAGGCTCTCCATTCAACGTAAGATGCTTGATTTTTTTGTTTCAAACAACAAAGACCTTTCAGCCACTCGTTCTATGCTCTGCTTTGATTGCAACCCCAGCTACGACCTTGATTTAAGCATGTCAAAAAGGCTTGTGAGACAGATTCAGCTTGTTCGAGTGTTGGATCTAAGGCTTCCAATTTCCTCCAAGCGTAAGATCCCCACAAATTTAAACATGTTAGTGCATCTAAGGTACTTAAGATTATATTTAGATAGCTTCTCTGTTAGCCAATCCCAAATATTGATTACAAACTTCATACGCAATCTGTGGAATCTAGAAACTTTAGAATTGGGATGTCCTAATCCTCGTGTTGACATATCATTCTGTAGTGGAATTTGGAAACTCAAGAGACTGAGACATCTTTATACGGCTAAACCTATAATTTTGCCTGAGTTGTTTTCAGATGTAGAAAGTAACATGTGGAATCTACAAACCCTATCTTGTGTTGTCATAAACCAAAAATCAGCTGTTGTGTCTCTAATTGGGAAAGGTGTATTCCCAAAGCTTAGGACTTTGGGGTTGCATTTCTGTAAGCATGATGACAAGCATAAACAAGGGTTTGGTGGTCAAGTGTGGGAATACCTTCCAAACCTAAATTATCTAAATGCATTGAAGATTTTTGGCTTCCCTGACATTCCATCATCCGTCAACGCCTTTCCTTCCAACCTTACCAAGCTAACAATCTCAAATACCAAAGTTAAATGA 2430 0.4202 MNVLCIKFSFTCFCSCVDSADLMADSVVSFVLENLSRLVTNEANLLCGVEDKVKFLESHLGMMSVFLESCEQNQRKKPIEQEIVRQIKDIAHEAEDVIDTFVVNVANYRRRSQLSRILHGASHAKLRRHVAKEIDNINARLNYLHENKIKYDNTQDAARSSTDQELQLVRKRRRDVEEDDVVGFQQDTAEVINRLKEGGSRRDVVSIIGMGGLGKTTLARNIYISDDVKGYFECRAWVSVSNDYRPREILHALLKCLMSISANTCYDINNSSSKENKKSEGEGKAESDGFYSLSEQDLKDKVRGCLKGKRYLIVLDDIWKPQHWDDIQSAFPDDNISSRILITSRLGEVASRASSSPPFYLPFLSEEESWELFSKRVFRGEDMPSELELLGKRMVKSCGGLPISIVVLAGILANKEKSYRVWSQIMGHVNSYLTRPETQVHDIVLKLSYDSLPQRLKPCFLYFGMFPEDYEIPVRRLIHLWVAEGFILHSDSRIVEDVAEDYLDELIDRSLIQEGRRRKDGGIKTCRIHDLLRELCIFEGKKHKVFEVCRDGDINWEQTRARRLSIQRKMLDFFVSNNKDLSATRSMLCFDCNPSYDLDLSMSKRLVRQIQLVRVLDLRLPISSKRKIPTNLNMLVHLRYLRLYLDSFSVSQSQILITNFIRNLWNLETLELGCPNPRVDISFCSGIWKLKRLRHLYTAKPIILPELFSDVESNMWNLQTLSCVVINQKSAVVSLIGKGVFPKLRTLGLHFCKHDDKHKQGFGGQVWEYLPNLNYLNALKIFGFPDIPSSVNAFPSNLTKLTISNTKVK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2019 809 Pfam Rx N-terminal domain 27 111 IPR041118 -
Alju04g2019 809 FunFam Probable disease resistance protein At1g63360 449 538 - -
Alju04g2019 809 PANTHER DISEASE RESISTANCE PROTEIN RP 53 805 IPR044974 GO:0006952
Alju04g2019 809 FunFam Probable disease resistance protein At1g61300 163 357 - -
Alju04g2019 809 Pfam NB-ARC domain 186 449 IPR002182 GO:0043531
Alju04g2019 809 Gene3D - 449 538 IPR036388 -
Alju04g2019 809 Gene3D Ribonuclease Inhibitor 596 809 IPR032675 -
Alju04g2019 809 Gene3D - 160 356 IPR027417 -
Alju04g2019 809 PRINTS Disease resistance protein signature 204 219 - -
Alju04g2019 809 PRINTS Disease resistance protein signature 398 412 - -
Alju04g2019 809 Gene3D - 27 142 - -
Alju04g2019 809 SUPERFAMILY RNI-like 587 807 - -
Alju04g2019 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 463 IPR027417 -
Alju04g2019 809 CDD RX-CC_like 24 141 IPR038005 -
Alju04g2019 809 Gene3D - 363 448 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2019 Alju-ChrAlju04 51244196 51246625 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2019 205 535 WRKY Transcription Factor Family AT5G45050 23.565 7.11e-08 54.3