Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2005 ATGTGGAATCTTCAAACCCTTTCTTGTGTTGCTGTAAACAAAAAATCAGCCGTGGTGTCTCTAATCAGGAAAGGTGTGTTCCCAAAGCTTAGGAGATTGGGGTTGCATTTATGTAAGGATGACAAGAATAAACAAGGGGTTGGTCAAGTGTGGGAAAATCTTCCAAAGCTAAATTATCTAAATGCACTGAAGATTGATGGCTTTCCTGATATTCCAACATCTGCTAATGTCTTTCCTTTTAGCCTTACCAAGCTAACAATCTTAAAGACCAAGTTAAATGAAGATGTCATGAGCACTATGGGAAGGCTTAGCAACCTTGGAATTTTGAAACTATGTTACTCTGAGTCTACAAAATCCTCAAGGTCTGAGTTAGAGCTTTGTTGCATTAATGGGTCCCCCCAACTAGAGGTTCCTGGGAGCAAGCGACAGAGAAGGATCGTCTTCATTTCATGCCTTGGAGGGATACTGAGCCACGGGGTTAACATGGAAGAAGGAGAAGCACTGAAGAGCAAGAAAGCTCAAGAACTCAGAAGCAGGAACTTGATGGCAGATAGCGTCGTTAGTTTCGTGCTGGAGAACTTGTCTAGGCTTGTGGCACACGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGTCACTTGAGAGTGAGCTCAGAATGATAAGTGTCTACCTTAAGAGCAGCAACCAAATCCAGCCGAAGAAGGAGATCGAACAAGAGGCTGTGCGTCAGATCACAGACATCGCACATGAAGCTGAGGATGTCATCGACACCTTCGTGGCCAACGTTGTCAGCCAACGAAGGAGAAGTTGGCTGTCCAAGATGCTCCATGGTGTTGAACACGCAAAGCTGCTGCACCATGTGGCAGAGAAAATAGACAACATTAAAGTCACTATCGATCAGATTTATGAGAACAGAATCAAATACGACATTCAGGAAGTAGCAGGATCTTCAAGAGATCAGGAGTTACAACTACTGCACAAGCGAAGAAGGGACGTGGAGGAAGATCACGTGGTGGGTTTTGAGCATGACACAACTGAAGTAATCAATCTCCTCAAGCAAGGAGGTTTACGTCGTAATGTGGTGTCCATCATTGGCATGGGTGGATTAGGTAAAACTACTCTTGCTCGCAAGATTTATAATAGTCATCATGTCAAGGATTACTTTGAGTGTCATGCTTGGGTTTATGTGTCTAATGACTATAGACCCAGAGAGCTTTTGCATGCCCTTCTTAAATGCTTGATGACAATGTCTGCAAATACACTTGATTACAATAAGAATAGCAGTAGCAAACACAAAAAGAAATCAAAGGGCAAAGGTAAAGCTGAATCTGATAATTTTCATAGTTTGAGTGAGGAAGAATTGAGAGACAAGGTACGAGAGTGTTTGAAAGGGAAGAGGTATCTTGTGGTGTTGGATGACATATGGAATCCTCAACATTGGGATGACCTACAGTATGCTTTCCCAGATGACAATAAAAGAAGCAGGATCCTGATTACTAGTCGTTTGAAGGAGGTGGCTTCTCATGCCAGCTCATTTCTTCCTTACTATCTCCCTTTTCTTAATGAAGAAGAAAGTTGGGAGCTTTTCTCAAAAAAGGTGTTTCGAGGAGAAGGCATGGCTTGTGATCTAGAGTTACTAGGTAAGCGCATGGTTAAAAGTTGTGGTGGCTTGCCAATATCCATTGTGGTGCTTGCAGGAATTCTGGCAAACAAGGAGAAGTCACACCGAGAATGGTCTAAGGTCCTGGGTCATGTAAACTCGTATCTCACTCAACCAGAAACACAAGTGCATGATATAGTACTTAAACTCAGTTATGATAGCTTGCCTCCAAGATTGAGGCCATGCTTTCTGTATCTTGGTATGTTTCCTGAAGACTACGAGATTCCTGTTAGAAGCTTGATCCAACTGTGGATTGCTGAAGGATTCATTCTTCATAGCGATTCCAGAATTGCAGAGGATGTTGCAGAGGACTACTTGAATGAGCTCATTGATCGTAGCTTAATCCTAGTAGGGAGAAGGAGAAGCGATGGGGGAATCAAGACATGTCACATCCATGATCTTTTGAGAGAACTTTGCATATCGGAGAGCAAGAAGGAGAAGGCTTTTGAAGTTTGTAGGGATCTAGACATTTTGGAGCAAACCAAACCTCGCAGGTTGTCAATTCAATGTAATACGTCAGATTTTTTAGTTTCAAGCAACAAAGACCATTCGGGCACTCGTTCTCTGCTCTGCTTTGATCGGGACTCCTATTACGACCTTGATTCGAGCAAGTCAAAAAGGCTAGTGAAATGGTTTCAGCTTGTTCGAGTGTTGGATCTAGGGCTTCCAAGTTCCTGTGAGTTTAAGATCCCTACCAATTTAAACATGTTAGTGCATTTGAGGTACTTGAGGCTAGACCTGCAGACAAGCTCTTATCCGGGATTAGTTAGAGCGATTCCTAGATTCATATGCAATCTTTGGAATCTAGAAACTTTGGACTTGGGGCGTTCTAGATTGACAATGTCCACACATTTCTCTAGCGGGATGTGGAAGCTCAAAAGATTGAGACATCTTCATACGGCCGGACCTGTGATTTTACCCGAGTTTCCAGAGATAGAAAGTAAAATCATGTGGAATCTACAAACCCTATCTTGTGTTGCCGTAAACAAAAACTCAGCCTTTGTGTCTCTTATAGGGAAAGGTGTATTCCCAAGGCTTAGGAGATTGGGATTGCATTTGTGTAAGGATGACGAGCATAAACAAGGGGTTGGTCAAGTGTGGGAAAACCTTCCAAACCTAAATTACCTAAATGCATTGAAGATTTATGGCTTTCCTGATATTCCGACATCTGTCAATGTGTTTCCTGTTAACCTTATCAAGCTAGCAATCTTATGCACCAACTTAAATAACGATGTCATGAGCACTTTGGGGAGTCTTACCAACCTCAGAATTTTGAAACTATCTGATTGTAAGTTTAAAAAAGCCTCAAGGTCTGAGTTAGAGCTTTGTTGCAGTAATGGATTCCCCCAACTAGAGGTATTTCAAATGACATTTTTGGAGGAGCTCTACCGCTGGGACTTAGGTAAAGATGTGATGCCATGTCTCAGATGTTTGATCATTGAAGAGTGTTGGAGGTTGACTGATCTCCCTGCCGAGCTCTGGTCCTTGACTTCCTTAAGAGAGGTACAAGTAAAAGGGGTCTCTCAATCAGTGAAGAAGCAACTCCAAAGTCAACCCATGAGAGATGGATGCAATCTCATTATTTCTAAAGGTCGTTTTTTTGACTGA 3273 0.4247 MWNLQTLSCVAVNKKSAVVSLIRKGVFPKLRRLGLHLCKDDKNKQGVGQVWENLPKLNYLNALKIDGFPDIPTSANVFPFSLTKLTILKTKLNEDVMSTMGRLSNLGILKLCYSESTKSSRSELELCCINGSPQLEVPGSKRQRRIVFISCLGGILSHGVNMEEGEALKSKKAQELRSRNLMADSVVSFVLENLSRLVAHEANLLCGVEDKVKSLESELRMISVYLKSSNQIQPKKEIEQEAVRQITDIAHEAEDVIDTFVANVVSQRRRSWLSKMLHGVEHAKLLHHVAEKIDNIKVTIDQIYENRIKYDIQEVAGSSRDQELQLLHKRRRDVEEDHVVGFEHDTTEVINLLKQGGLRRNVVSIIGMGGLGKTTLARKIYNSHHVKDYFECHAWVYVSNDYRPRELLHALLKCLMTMSANTLDYNKNSSSKHKKKSKGKGKAESDNFHSLSEEELRDKVRECLKGKRYLVVLDDIWNPQHWDDLQYAFPDDNKRSRILITSRLKEVASHASSFLPYYLPFLNEEESWELFSKKVFRGEGMACDLELLGKRMVKSCGGLPISIVVLAGILANKEKSHREWSKVLGHVNSYLTQPETQVHDIVLKLSYDSLPPRLRPCFLYLGMFPEDYEIPVRSLIQLWIAEGFILHSDSRIAEDVAEDYLNELIDRSLILVGRRRSDGGIKTCHIHDLLRELCISESKKEKAFEVCRDLDILEQTKPRRLSIQCNTSDFLVSSNKDHSGTRSLLCFDRDSYYDLDSSKSKRLVKWFQLVRVLDLGLPSSCEFKIPTNLNMLVHLRYLRLDLQTSSYPGLVRAIPRFICNLWNLETLDLGRSRLTMSTHFSSGMWKLKRLRHLHTAGPVILPEFPEIESKIMWNLQTLSCVAVNKNSAFVSLIGKGVFPRLRRLGLHLCKDDEHKQGVGQVWENLPNLNYLNALKIYGFPDIPTSVNVFPVNLIKLAILCTNLNNDVMSTLGSLTNLRILKLSDCKFKKASRSELELCCSNGFPQLEVFQMTFLEELYRWDLGKDVMPCLRCLIIEECWRLTDLPAELWSLTSLREVQVKGVSQSVKKQLQSQPMRDGCNLIISKGRFFD 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2005 1090 FunFam Probable disease resistance protein At1g63360 607 696 - -
Alju04g2005 1090 Pfam Rx N-terminal domain 186 271 IPR041118 -
Alju04g2005 1090 FunFam Probable disease resistance protein At1g61300 322 513 - -
Alju04g2005 1090 Gene3D Ribonuclease Inhibitor 919 1077 IPR032675 -
Alju04g2005 1090 Gene3D - 607 697 IPR036388 -
Alju04g2005 1090 PANTHER DISEASE RESISTANCE PROTEIN RP 212 1038 IPR044974 GO:0006952
Alju04g2005 1090 MobiDBLite consensus disorder prediction 426 446 - -
Alju04g2005 1090 Gene3D - 186 291 - -
Alju04g2005 1090 SUPERFAMILY L domain-like 686 1060 - -
Alju04g2005 1090 Gene3D - 324 514 IPR027417 -
Alju04g2005 1090 CDD RX-CC_like 183 303 IPR038005 -
Alju04g2005 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 621 IPR027417 -
Alju04g2005 1090 Pfam NB-ARC domain 346 607 IPR002182 GO:0043531
Alju04g2005 1090 PRINTS Disease resistance protein signature 972 988 - -
Alju04g2005 1090 PRINTS Disease resistance protein signature 556 570 - -
Alju04g2005 1090 PRINTS Disease resistance protein signature 362 377 - -
Alju04g2005 1090 Gene3D - 521 606 IPR042197 -
Alju04g2005 1090 Gene3D Ribonuclease Inhibitor 750 918 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2005 Alju-ChrAlju04 51121935 51128127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2005 340 693 WRKY Transcription Factor Family AT5G45050 24.011 6.50e-10 61.6