Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g2003 ATGGCAGATAGTGTCGTTAGTTTTGTGCTGGAGAACTTGTCTAGGCTTGTGGCACACGAAGCCAATTTGCTATGTGGCGTGGAGGACAAAGTGAAGTCCCTTGAGAGTGAGCTCAGAATGATAAGTGTCTACCTTAAGAGCAGCAACCAAATCCAGCCGAAGAAGGAGATCGAACAAGAGGTTGTGCGTCAGATCACAGACATCGCACATGAAGCTGAGGATGTCATCGACACCTTCGTGGCCAACGTTGTCAGCCAACGAAGGAGAAGTTGGTCGTCCAAGATACTCCATGGTGTTGAACACGCAAAGCTGCTGCACCATGTGGCAGAGAAAATAGACAACATTAAAGTCACTATCGATCAGATTTATGAGAACAGAATCAAATACGACATTCAGGAAGTAGCAGGATCTTCAACAGATCAGGAGTTACAACTACTGCACAAGCGAAGAAGGGACGTGGAGGAGGATGACGTGGTGGGTTTCCAGCATGACACAGCCCAAGTAATCAATCTCCTCGAGCAAGGGGGTTCGCGTCGTAGCGTGGTGTCCATCATAGGTATGGGCGGATTAGGTAAAACTACTCTTGCTCGCAAGATTTATAACAGTCATCATGTCAAGAATTACTTTGAGTGTCAGGCTTGGGTCTATGTGTCTGATGACTATAGACCTCGAGAGCTTTTGCATGCCCTTCTTAAATGCTTGATGACAATGCCTGCAAATGCATGTGATTACAATAAGAATAGCAGTACCAAACACAAAAAGAAATCAAAGGGCAAAGGTAAAGCTGAATCTGATAATTTTCATAGTTTGAGTGAGGAAGAATTGAGAGACAAGGTACGAAAGTGTTTGAAAGGGAAGAGGTATCTTGTGGTGTTGGATGACATATGGAATCCTCAACATTGGGATGACCTACAGTATGCTTTCCCAGATGACAATAAAAGAAGCAGGATCCTGATTACTAGTCGTTTGAAGGAGGTGGCTTCTCATGCCAGCTCATTTTTTCCTTACTATCTCCCTTTTCTTAATGAAGAAGAAAGTTGGGAGCTTTTCTCAAAAAAGGTGTTTCGAGGAGAAGGCATGGCTTGTGATCTAGAGTTACTAGGTAAGCGCATGGTCAAAAGTTGTGGTGGCTTGCCAATATCCATTGTGGTGCTTGCAGGAATTCTCGCAAACAAGAAGTCACACCGAGAATGGTCTAAGGTCATGGGTCATGTAAACTCGTATCTCACTCAACCAGAAACACAAGTGCATGATATAGTACTTAAACTCAGTTATGATAGCTTGCCTCCAAGATTGAAGGCATGCTTTCTGTATTTTGGTATGTTTCCTGAAGACTACGAGATTCCTGTTAGACGCTTGATCCAACTGTGGATTGCTGAAGGATTCATTCTTCATAGCGATTCCAGAATTGCAGAGGATGTTGCAGAGGACTACTTGAATGAGCTCATTGATCGTAGCTTAATCCAAGTAGGGAGAAGGAGAAGCGATGGGGGAATCAAGACATGTATTATCCATGATCTTCTGAGAGAACTTTGCATATCGGAGGGCAGGCAGGAGAAGGCTTTTGAAGTTTGTAGGGATGTAGACATTTTGGAGCAAACCAAACCTCGTAGGCTGTCAATTCAATGTAATACGTCAGATTTTTTAGTTTCAAGCAACAAAGACCATTCGGGCACTCGTTCTCTGCTCTGCTTTGAACGGGACTCCTATTACGACCTTGATTCAAGCAAGTCAAAAAGGCTTGTGAAGTGGTTTCAGCTTGTTCGAGTGTTGGATCTAGGGCTTCCATGTTCCAGTGAGTTTAAGATCCCTACCAATTTAAACATGTTAGTGCATTTGAGGTACTTGAGGCTAGACCTGAATACAAGGTTTCGTGTGGGAGTTGTTAGAGCGATTCCTAGATTCATATGCAATCTTTGGAATCTAGAAACTTTGGACTTGGGGTGTTTTATGTTGATGATATCCATACCTTTCTCTAGTGGGATCTGGAAGCTCAAAAGGCTAAGGCATCTTCATACGGCCGGACCTGTGATTTTACCCAAATTTCCAGAGATAGAAAGTAAAACCATGTGGAATCTACAAACCCTATCTTGTGTTGCCGTAAACAAAAAATCAACCATTGTGTCTCTTATAGGGAAAGGTGTATTCCCAAGGCTTAGGAGATTGGGGTTGTATCTGTGTAAGGATGACAAGCATAAACAAGGGGTTGGTCAAGTGTGGGAAAACCTTCCAAACCTAAAATATCTAAATGCATTGAAGATTTATGGCTTTCCTAATATTCCAACATCTGTCAATGCGTTTCCCGTTAACCTTACCAAGCTAGTAATCTTATGGAACAACTTAAATAACGATGTCATGAGCACTTTGGGGAGTCTTACCAATCTCAGAATTTTGAAACTAAGTGATTGTGAGATTAAAACAGCCTCAAGGTCTGAGTTAGAGCTTTGTTGCGGTGATGGGTTCCCCCAGCTAGAGGTATTTCAAATGAGATATTTGACGAAGCTCTACCGCTGGGAATTAGGTAAAGATGTGATGCCTTGTCTTAGATGTTTGATCATTGAAGAGTGTGACGAGTTAATTGCTCTCCCTGACGAGCTCTGGTCCCTGACATCCTTACGAGAGGTAAAAGTAGAAGGGCCCACTGAATCACTAAAGAAGCAACTCCAAAATCAACCAATGAGAGATGGATGCAATCTCTTCATGCTTGACTAA 2712 0.4277 MADSVVSFVLENLSRLVAHEANLLCGVEDKVKSLESELRMISVYLKSSNQIQPKKEIEQEVVRQITDIAHEAEDVIDTFVANVVSQRRRSWSSKILHGVEHAKLLHHVAEKIDNIKVTIDQIYENRIKYDIQEVAGSSTDQELQLLHKRRRDVEEDDVVGFQHDTAQVINLLEQGGSRRSVVSIIGMGGLGKTTLARKIYNSHHVKNYFECQAWVYVSDDYRPRELLHALLKCLMTMPANACDYNKNSSTKHKKKSKGKGKAESDNFHSLSEEELRDKVRKCLKGKRYLVVLDDIWNPQHWDDLQYAFPDDNKRSRILITSRLKEVASHASSFFPYYLPFLNEEESWELFSKKVFRGEGMACDLELLGKRMVKSCGGLPISIVVLAGILANKKSHREWSKVMGHVNSYLTQPETQVHDIVLKLSYDSLPPRLKACFLYFGMFPEDYEIPVRRLIQLWIAEGFILHSDSRIAEDVAEDYLNELIDRSLIQVGRRRSDGGIKTCIIHDLLRELCISEGRQEKAFEVCRDVDILEQTKPRRLSIQCNTSDFLVSSNKDHSGTRSLLCFERDSYYDLDSSKSKRLVKWFQLVRVLDLGLPCSSEFKIPTNLNMLVHLRYLRLDLNTRFRVGVVRAIPRFICNLWNLETLDLGCFMLMISIPFSSGIWKLKRLRHLHTAGPVILPKFPEIESKTMWNLQTLSCVAVNKKSTIVSLIGKGVFPRLRRLGLYLCKDDKHKQGVGQVWENLPNLKYLNALKIYGFPNIPTSVNAFPVNLTKLVILWNNLNNDVMSTLGSLTNLRILKLSDCEIKTASRSELELCCGDGFPQLEVFQMRYLTKLYRWELGKDVMPCLRCLIIEECDELIALPDELWSLTSLREVKVEGPTESLKKQLQNQPMRDGCNLFMLD 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g2003 903 Gene3D Ribonuclease Inhibitor 738 894 IPR032675 -
Alju04g2003 903 Pfam NB-ARC domain 167 425 IPR002182 GO:0043531
Alju04g2003 903 Gene3D - 340 424 IPR042197 -
Alju04g2003 903 Pfam Rx N-terminal domain 5 93 IPR041118 -
Alju04g2003 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 439 IPR027417 -
Alju04g2003 903 FunFam Probable disease resistance protein At1g63360 425 514 - -
Alju04g2003 903 PANTHER DISEASE RESISTANCE PROTEIN RP 31 857 IPR044974 GO:0006952
Alju04g2003 903 CDD RX-CC_like 2 122 IPR038005 -
Alju04g2003 903 Gene3D - 5 122 - -
Alju04g2003 903 MobiDBLite consensus disorder prediction 245 267 - -
Alju04g2003 903 SUPERFAMILY L domain-like 504 878 - -
Alju04g2003 903 Gene3D - 143 332 IPR027417 -
Alju04g2003 903 Gene3D - 425 515 IPR036388 -
Alju04g2003 903 FunFam Probable disease resistance protein At5g66910 340 425 - -
Alju04g2003 903 Gene3D Ribonuclease Inhibitor 565 736 IPR032675 -
Alju04g2003 903 PRINTS Disease resistance protein signature 790 806 - -
Alju04g2003 903 PRINTS Disease resistance protein signature 375 389 - -
Alju04g2003 903 PRINTS Disease resistance protein signature 181 196 - -
Alju04g2003 903 FunFam Probable disease resistance protein At1g61300 141 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g2003 Alju-ChrAlju04 51073222 51075933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g2003 182 520 WRKY Transcription Factor Family AT5G45050 26.254 1.09e-09 60.5