Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1989 ATGGGAGATTCAGAGCATCAGAGGAATGTGAATCTTCCTCCTGGGTTTCGCTTCTATCCTTCGGATGAAGAGCTCGTTGTTCACTTCCTTCACAGAAAAGCTTCCCTCTTGCCTTGCCACCCAGATGTCATCCCTGATCTTGACCTCTTCCCCTACGATCCTTGGGACCTTCATGGTAAGGCTTTGGGAGAAGGGAATCAATGGTACTACTTCAGCAGAAGAACACAGAATAGAGTGACTAATAATGGGTATTGGAAAGCAATGGGAATGGAAGAGCCAATAGTTACAAGCTCAAATAGTAAAATTGTTGGAGTCAAGAAATATTTCATCTTCTTCATGGGAGAATCTCCTTCTGGTATCAAAACCAACTGGGTAATGCAAGAGTACCGTCTCTCAGATTCTTCCTCTTCCTCTTCCTCTTCTTCTTCTAGCAGATCATCCAAGAGAAAATCCAAAACAGATTACTGTAAATGGGTGATTTGTCGAGTTTACGAGCGTGACGACGATGATAATGATGGAGGAACTGAGCTCTCATGTTTGGATGAAGTTTTCTTGTCACTGGATGATCTTGATGAAATCAGCCTTCCCAATTAA 594 0.4276 MGDSEHQRNVNLPPGFRFYPSDEELVVHFLHRKASLLPCHPDVIPDLDLFPYDPWDLHGKALGEGNQWYYFSRRTQNRVTNNGYWKAMGMEEPIVTSSNSKIVGVKKYFIFFMGESPSGIKTNWVMQEYRLSDSSSSSSSSSSSRSSKRKSKTDYCKWVICRVYERDDDDNDGGTELSCLDEVFLSLDDLDEISLPN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1989 197 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Alju04g1989 197 Gene3D NAC domain 21 170 IPR036093 GO:0003677|GO:0006355
Alju04g1989 197 Pfam No apical meristem (NAM) protein 13 131 IPR003441 GO:0003677|GO:0006355
Alju04g1989 197 PANTHER NAC TRANSCRIPTION FACTOR 56 12 171 - -
Alju04g1989 197 FunFam NAC domain-containing protein 104 21 169 - -
Alju04g1989 197 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1989 Alju-ChrAlju04 50940458 50941604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1989 1 167 NAC Transcription Factor Family AT1G61110 43.750 6.60e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju04g1989 NAM 3.6e-29 No_clan