Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1962 ATGGAAGCTTTATCCTTAAGACCATCCCTAATTGTTCCCTATAGACCCTCCCATGGCCTTAACTCACTCTCAAAAAAATTGCAAAACCAGAGGCTTCATGTTACTCGACGACGTGTTTCATGTGGAGCGAGAAAACTAGTTGTTGAGGTTGAAGAGACAACTTCTAAAGACTTTTACAAGATGTTGTCTTTGAATCCCGAGAGTGCGACTAGACATGAGATCAAGAAGGCGTATAGAATGATGGCGCTTCAGTACCACCCGGACATGTGTCAAGATCCTTCGAGGAAGGAGAAGTGTACGAGGATGTTTGTGCAGCTCCATGCAGCTTACCAGACATTATCGGATCCGGTGCTCCGAGAAGAGTATGATTATGAACTTGGCTTGATCACAAGCAAGAGGAATGATAAGAGTGTTAATGAAGTTGGAGGTGAAAGATGGAGAAGAAGGTGGGAAGATCAATTGGTTGAGTTGAAGAGAAGGTCTAATACAAGAGTGGTTCAAAAGGAAGGATCATCTTGGGGAAGTAGAATTAGGGCTCAAAACATGAAAAATCATAATTAG 561 0.426 MEALSLRPSLIVPYRPSHGLNSLSKKLQNQRLHVTRRRVSCGARKLVVEVEETTSKDFYKMLSLNPESATRHEIKKAYRMMALQYHPDMCQDPSRKEKCTRMFVQLHAAYQTLSDPVLREEYDYELGLITSKRNDKSVNEVGGERWRRRWEDQLVELKRRSNTRVVQKEGSSWGSRIRAQNMKNHN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1962 186 SMART dnaj_3 56 118 IPR001623 -
Alju04g1962 186 CDD DnaJ 57 115 IPR001623 -
Alju04g1962 186 Pfam DnaJ domain 57 123 IPR001623 -
Alju04g1962 186 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Alju04g1962 186 Gene3D DnaJ domain 45 148 IPR036869 -
Alju04g1962 186 SUPERFAMILY Chaperone J-domain 53 126 IPR036869 -
Alju04g1962 186 PRINTS DnaJ domain signature 78 93 IPR001623 -
Alju04g1962 186 PRINTS DnaJ domain signature 60 78 IPR001623 -
Alju04g1962 186 PRINTS DnaJ domain signature 98 118 IPR001623 -
Alju04g1962 186 ProSiteProfiles dnaJ domain profile. 57 126 IPR001623 -
Alju04g1962 186 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 29 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1962 Alju-ChrAlju04 50391308 50391868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1962 59 123 C2H2 Transcription Factor Family AT1G74250 38.806 9.22e-06 43.5