Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1955 ATGGGGTTTCCACTTTTTGCTCTTGAACATGGTCTCGTCGCTGTTCTTCTGGCTGCACAATTAATGAACACACTTGTTGTGGCTCAAGGTAGTCCTTTAAGTAACCCTGTGGAGAAAGATGCTCTTCATGGTCTCAAGGCCACTTTCAATGACCCTTTCCTGAATAGTAACTGGATTGGCTTCCCCTGCAATGAGGCTGAACTGTCAAGATGGTTCGGGATTCGCTGTAGTATCAGTGGTCGAGTCACCGGGATCGTACTGGAAGGTATGGGGCTAACCAGAAAAATCGATGTCAAGGCGTTCTTCAACCTTACAGAGTTGTCCATTCTGAGCTTCAAGAATAATTCCCTGAAGGGAAATTTGATGGATTTCTCCAACAACCATCGCTTGAAGTACATTGATTTATCCAGTAATGAGTTTGATGGGCCAATACCAAGATCCCTTCTGAATCTTAACCTCTTGGAAACGTTGTTACTGCAAGATAATAAGCTCATAGGTCCACTTCCAGAGTTCAGTCAACCAAGTTTGAAGATAATCAATGTGTCAGGCAATGATCTTCACGGCAAAATCCGAATAACTCAAAATTTTCGATCACGAGGGCCTGATTCATTTTCTGGCAACCCCAGATTATGTGGTCCTCTTTCTCTCAAATCCTGCAGCTCTAGCTTGAAAGCTTCAATTCCAACACCAGGAGGCTACTCAGAAAACGAGGAGGCCGAAAACCAGAATGGATCTTCAAATAAAGACAACACTTCCACTATCCTAATAATTTTCAACGTGGTTCTTCTGTTTGCAATAATCTTGCTAGCTTTTCTTTACTACAAGACAGCTAAGAAGCTCAACAACATTATGAACCAGCAGATTCCCATTAATAAAGATTTGATGGAGAGTACTGTTGATAAGGTCGAAATGAGAGATCGTCAGAGTTCGGTAGTTATGGCAGTGGAAGAGAAGAAGGAGCTTATGTTCTTTACGGATGAGCCAAAGTTTCAAATGAACGAACTCCTAAAGGCTTCTGCAGAGGGACTGGGTCAGGGAATAATGGGAAACAGCTATAAGGCTATGCTGAATGGAGGAGCTTCCATTGTTGTAAAGAGGCTGAGGGACTTGAAGCCAATGACAAGAGAGGATTTTGCAAAGCAATTGCATGAAATTGCTGATCTGAAGCATCCAAATTTATTGCCTTTGCTTGCTTATTACAATTCCAGAGATGAGAGGTTGCTGCTCTACAGATATGCAGAGAAGGGAAATCTTTACTTCAGGCTTCATGGAAACAGAAGTGGAAACCGGATTCCATTCACATGGAATTCAAGGTTATCAGTGGCAAAAGGAGTAGCCAGAGGATTAACTTACCTTCATCTCAATGCCAAGCCCAACACCACCACCACCACCACCACCATGGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCCTGCTAGATGAAAACGACACAGTCCTCGTCTCTGACTACGGACTTTCCTCCCTCATAGCACAAGCCGTAGCAGCTCAACGCATGGTCGTCTACAAATCACCCGAATATGGGTACGCCAGAAAAGTATCAAAGCAATCTGATGTCTGGAGCTATGGAAGCCTTCTTATAGAACTTTTAACAGGCAGGTTATCTGCATGTTCAGCCCCACCTGGAGTTACCGGATCGGATCTCTGTAGCTGGGTCCACCGAGCAGTGAGGGAAGAATGGACGGCGGAGATATTCGATAAGGAAATTTCCGGTCAGAGAAGTGCCCTTCCCGGAATGCTAAGATTACTTCAGATCGCAATGCGTTGCACCGATAGGTTCCCTGAGAATCGGCCAGATATGAGGGAGGTTGTGAGAGAAGTAGAGAAGATTGAGGTGGTTCCATGGACATCAGAAGATGAAGAAGATGTATCTGGAGATAGATCTATAACAGATGATTCTCTCTACTCAACCAGTACTGCTACCTCAGGTATTATCGAGGATGACATGTAG 1971 0.4424 MGFPLFALEHGLVAVLLAAQLMNTLVVAQGSPLSNPVEKDALHGLKATFNDPFLNSNWIGFPCNEAELSRWFGIRCSISGRVTGIVLEGMGLTRKIDVKAFFNLTELSILSFKNNSLKGNLMDFSNNHRLKYIDLSSNEFDGPIPRSLLNLNLLETLLLQDNKLIGPLPEFSQPSLKIINVSGNDLHGKIRITQNFRSRGPDSFSGNPRLCGPLSLKSCSSSLKASIPTPGGYSENEEAENQNGSSNKDNTSTILIIFNVVLLFAIILLAFLYYKTAKKLNNIMNQQIPINKDLMESTVDKVEMRDRQSSVVMAVEEKKELMFFTDEPKFQMNELLKASAEGLGQGIMGNSYKAMLNGGASIVVKRLRDLKPMTREDFAKQLHEIADLKHPNLLPLLAYYNSRDERLLLYRYAEKGNLYFRLHGNRSGNRIPFTWNSRLSVAKGVARGLTYLHLNAKPNTTTTTTTMAPHGNLKSSNVLLDENDTVLVSDYGLSSLIAQAVAAQRMVVYKSPEYGYARKVSKQSDVWSYGSLLIELLTGRLSACSAPPGVTGSDLCSWVHRAVREEWTAEIFDKEISGQRSALPGMLRLLQIAMRCTDRFPENRPDMREVVREVEKIEVVPWTSEDEEDVSGDRSITDDSLYSTSTATSGIIEDDM 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1955 656 SUPERFAMILY Protein kinase-like (PK-like) 342 622 IPR011009 -
Alju04g1955 656 SUPERFAMILY L domain-like 38 210 - -
Alju04g1955 656 Gene3D Transferase(Phosphotransferase) domain 1 414 635 - -
Alju04g1955 656 Gene3D Ribonuclease Inhibitor 36 220 IPR032675 -
Alju04g1955 656 Coils Coil 656 656 - -
Alju04g1955 656 MobiDBLite consensus disorder prediction 227 247 - -
Alju04g1955 656 Gene3D Phosphorylase Kinase; domain 1 302 412 - -
Alju04g1955 656 Pfam Protein tyrosine and serine/threonine kinase 341 613 IPR001245 GO:0004672|GO:0006468
Alju04g1955 656 ProSiteProfiles Protein kinase domain profile. 337 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1955 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 618 IPR046959 -
Alju04g1955 656 SMART serkin_6 337 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1955 Alju-ChrAlju04 50238575 50241072 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1955 54 644 Receptor kinase-like Gene Family AT2G36570 33.538 1.71e-94 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju04g1955 PK_Tyr_Ser-Thr 6.9e-28 CL0016