LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g1942	ATGGCTGAGGCGGGGGATCCTGAGAGAGGTGAAATCAATGGTGGATTCTCGATGGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGAGGATAATTCGGAGATAGAGGAAGATGAGGCAGATTCGCGGCATCAGTACATGTTGGATTCGGAGGATGAAGAAAATGGCGAGCAAAGGCTAATCCGTACGGGCCCGCGAATCGACTCATTCGATGTTGAAGCTCTTGAGGTTCCTGGTGCTCAAAGAAATGACTATGATGAGGATATCAGTGTGGGAAGGAGAATAATATTAGCTTTTCAGACGCTTGGTGTTGTCTTTGGTGATGTTGGAACAAGCCCATTGTATACTTTCAGTGTTATGTTTAGAAAAGCTCCTATAAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTTCTGTACACCTTAATCTTGATTCCTCTTGTGAAGTATGTTCTGGTTGTTTTGTGGGCCAATGATGACGGCGAAGGTGGTACTTTTGCCTTGTACTCCTTAATTTGTCGTCATGCTAAGGTGAGTCTTTTGCCGAATCAGCTGCCATCTGATGCCCGCATATCAAGCTTTAGGCTAAAGGTTCCATCCCCTGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTGGAGACTTCACTAACTTTAAAGAAGATTCTACTTGTATTAGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCTATGTCAGTACTTTCATCTGTTGGAGGTTTGAAAGTTGGGGTGGATGCGATTGAACATGATGAAGTGGTGGTGATTTCTGTTGCCTGCCTCATCGTTTTGTTCAGTGTACAAAAGTATGGAACGAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTATTCATATGGTTTTGTTCTCTTGCGGGCATTGGGATATACAATCTCCTCAAATATGATACCACTGTCTTGAGGGCATTTAATCCAATTCATATATATTACTTCTTCAAGAGGAATTCTACTAATGCATGGTATTCTCTTGGGGGTTGTCTTCTTTGTGCTACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTTCTTTTGTCTTTCTTGTTTTTCCATGCCTAGTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAGAACTATGCTGATGCTGGTCAAGCCTTTTTTTGTTCTGTTCCAAGTGGTGTATTCTGGCCAGTTTTTCTTATTGCTAATGTTGCTGCACTAATTGCAAGTCGTGCTATGACAACAGCCACTTTTTCATGCATAAAGCAATCGACTGCACTTGGCTGTTTCCCTCGTCTTAAAATCATTCACACTTCACGCAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTTTTGGCTGTTTCGCTAGTGTTTGTCTACTCTATATCCAATATTGATGAGATAGGGAATGCATATGGCATTGCTGAGATCGGGATGATGATGATGACAACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATCCACATCATCATAGTGTTGAGTTTTGTGGTAGTGTTCTTGGGATTGGAATTGACTTTCTTTTCATCAGTTTTGTGGAGTGTGGGAGATGGAAGTTGGATAATATTGGTCTTTGGCATAATAATGTTTCTCATCATGTATATATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATTTAATGCGAGAATTGGGTTGCAATCTTGGGACGATTCGAGCTCCTGGGATAGGTTTACTGTATAATGAGTTGGTTAAAGGAATTCCCGCAATTTTTGGTCATTTTCTGACTACGCTTCCAGCAATACACTCCATGATTATATTTGTGTGCATCAAGTATGTTCCAGTTCCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGCGGGTCTGCCCAAAAAACTACCATATATTTCGTTGTATTGCCAGATATGGTTATAAAGATGTTCGCAAAGAAAATCACCAGGCTTTTGAGCAGTTGCTAATTGAGAGCCTGGAGAAGTTCATACGTCGAGAGGCTCAAGAGCGATCACTAGAAAGTGATGGAGACGATGATTCAGATGCAGAGGAAGAGAATTCTGCTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTCTACTCACTTGGTGTTCCTCTTTTGGCTGATTTCCAGCATACACACAACCCCATTTTAGATGCAAGCACATCACATGAGATTAACCCAGATTCTTCAAGTCCCCCAGTGCTTGATGCAGAACAAAGTCTTGAAAGGGAGTTGTCTTTTATACGGAAAGCGAAAGAATCTGGAGTTGTTTATCTTCTGGGGCATGGGGATATAAGGGCAAGGAAGGATTCCTGGTTTCTCAAGAAGCTGGTTATTAACTATTTTTACGCTTTCTTGAGAAAGAACTGCAGAAGAGGGATCACAACTTTAAGCGTACCCCACTCAAATCTGATGCAGGTTGGCATGACTTACATGGTTTGA	2535	0.4193	MAEAGDPERGEINGGFSMDSTESRWVFQEDEDNSEIEEDEADSRHQYMLDSEDEENGEQRLIRTGPRIDSFDVEALEVPGAQRNDYDEDISVGRRIILAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKKILLVLVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEHDEVVVISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLLKYDTTVLRAFNPIHIYYFFKRNSTNAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLSFVFLVFPCLVLGYLGQAAYLMENYADAGQAFFCSVPSGVFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVYSISNIDEIGNAYGIAEIGMMMMTTILVTLVMLLIWQIHIIIVLSFVVVFLGLELTFFSSVLWSVGDGSWIILVFGIIMFLIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKNYHIFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDSDAEEENSASRVLIAPNGSVYSLGVPLLADFQHTHNPILDASTSHEINPDSSSPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFLKKLVINYFYAFLRKNCRRGITTLSVPHSNLMQVGMTYMV	844

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g1942	844	Pfam	K+ potassium transporter	99	672	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Alju04g1942	844	MobiDBLite	consensus disorder prediction	1	58	-	-
	Alju04g1942	844	NCBIfam	potassium uptake protein	98	844	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Alju04g1942	844	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	94	842	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Alju04g1942	844	MobiDBLite	consensus disorder prediction	39	58	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g1942	Alju-ChrAlju04	49908261	49916140	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g1942	8	844	Inorganic Solute Cotransporters	AT5G09400	78.916	0.0	1320