Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1941 ATGGCGCTTTCAATTTCAACTCTGAACCATTTCTCATCCACACACCTCAAATGCCTTCCTTCCATTTCCAACTTCACCATTCTCGCGTCCTCTGCCTTCTTGCCGAGGAGATTGTCTGCGCGGGCCATTCCAAAACGCTGTCGTTTCGGATGCGTTTCCGCCTTCGCTGCTTCTGGAGATGACAATTCCCGACGGTGTGGTGATCTTTCGTCCCTCTCACCTGAAATTGTTGTTCTCAATGTTGAGGGTATGATGTGCGAGGGATGTGCAGATAGTGTGAAGAAACTTCTAGAGAGTCGGCCTCAGGTATCATCTGCTAGTGTAAATCTAGCCGAAAAAATAGCAACAGTTTGGCCAGCACCTGAAGCAAAAACTGAATCAAATTGGCATAATATATTCGGAGGTGGACTTGCTGAGCATTTAACTAACTGTGGCTTCAAATCTAGCCTTCAAGGTCAGGAAGATAGCAACTGA 474 0.4662 MALSISTLNHFSSTHLKCLPSISNFTILASSAFLPRRLSARAIPKRCRFGCVSAFAASGDDNSRRCGDLSSLSPEIVVLNVEGMMCEGCADSVKKLLESRPQVSSASVNLAEKIATVWPAPEAKTESNWHNIFGGGLAEHLTNCGFKSSLQGQEDSN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1941 157 Pfam Heavy-metal-associated domain 78 124 IPR006121 GO:0046872
Alju04g1941 157 ProSiteProfiles Heavy-metal-associated domain profile. 75 149 IPR006121 GO:0046872
Alju04g1941 157 Gene3D - 76 154 - -
Alju04g1941 157 ProSitePatterns Heavy-metal-associated domain. 81 110 IPR017969 GO:0046872
Alju04g1941 157 CDD HMA 78 149 IPR006121 GO:0046872
Alju04g1941 157 SUPERFAMILY HMA, heavy metal-associated domain 76 127 IPR036163 GO:0046872
Alju04g1941 157 FunFam Copper-transporting ATPase PAA1, chloroplastic 75 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1941 Alju-ChrAlju04 49904607 49906323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1941 73 149 Primary Pumps ATPases AT4G33520 58.442 4.04e-27 100