Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1939 ATGCAAGAACTTCATTACTTGTGTTGTTACAACAGCTATGTTGAGGACTTCGAAAATGAAAAGAAACATTTGAGGGCAAGAAGAGAAACAATACAGAAAGATATTGAAGAAGCCCGTAACAGAAATGAGAATCAGATCGAAAGTGAAGTTGAACTATGGAGAGAAGAAGCAGATCGTCTCATAAAGGAAGACACAAAAGGAAAGGAGAAATGGTTTGGTTTGGTTACTAATTGCTTTTGGCAGTACAATCGAGGCAAGGACTTGAAAGACAAGAAGCAAAGGATTCAACAAATAGTGGAACAGAGTAATAACTTTACTCGTGTTGCACGTTCAACTGGGCTTCCAGGAATCGAGTTCTATTCTTTTGAAAATTTTATGCAACTTAAGGATAGAAAATTGCAATTTGGAAAACTGACGGAGGCGTTGAAAAATGACAAGAAGTTTATGATTGGACTGTATGGGCTAGGGGGAACAGGGAAAACCACCATGGCCATAGAAGTATGTAAAGAAGTTGCAGAATCAAAGGTGTTTGATAAAGTCATCTTTAGTGTTGTTTCAAAGGATGCAAACTTGAAAAAGATTCGAGACAACATTGCAAAACACTTAAATTTTCCTTTAAATGAAGGAACAAATGACTCAGAACAGAAACTACAATTGTGGAAAAGAATAGCAGAAGGTGGAGAAAAGGTGCTTCTCATACTAGATGATGTGTGTGAAAAGCTTTCATTGCAAGATATAGGGATTCCCCTTGGCCGTCATGGCAAAAGTAGTTGTTCTATGTTGATTACCACACGGGATTGGAGAGTTTGTAGAGATATGGGATGCCATGAGACTATTGAACTCGAGGTCTTAAATGAAAAGGATGCAGTTGATCTTTTCCTATCTTATGCTGACAAGAGCACAGATAGTTCTTCCAATGGTTTTAAAGATGTGGCTTTAGGTATTGTGAAGGAGTGTGGAAGATTACCAGTTGCAATTGTAGCAGTCGCAAGGGCATTAAAGTCTAAACCTCTAAAAGAATGGAAGCACGGTTTGGAAAGATTGCAGAATCTTGAGTCGGTTCATGATGTTAAAGAAGATTTAAAAGAGGCTTATAATTCTTTGAGAATAAGTTACGATCATCTCAAGAATAAAAAGGCCAAACAACTCTTCCTCTTGTGTGCTCTCTTCCCTGAAGATTATGAAATACCTATAGAACTTTTAACCAGAATTGCTATAGGTCTCGAGCTTTGTGGAGGAGCTAACATATACTCTTCTGCAAGAAGTCATTTCACTCCAATTAAAAATGATCTCATAGATTCTTGTTTACTATTAAAGGCTTCAGATGAATATGTAAAAATGCATGACTTGGTTCGAGAGGTGGCTTTGTGGATTGGAAACAAACAAGTTCAAGTGGCCATGGATTCTAACACAACTTTAATGGATGGTATCCAGTATTCATCTTGGAACGTAATTGACTTTCCAAGCCATCTTGATGGTAGAAAACTTGAGGTTCTCTTAGTTTGGATAAATAGTGCAAGTTCTTCTTCAATGAAGGTTCCAAATGCTTACTTTGAAGGGATGGAGAACCTTAAAATTTTGGCTATAATGAGTCAATCAAGATTGAGAATTTCAGCTGCATCCTTATTTCAATCACCTTTGTCATTGATAAATGTTCGAACTTTATCCATACAAGAATTTGCGTTAGGAGATATATCATTGTTAGTAAACTTAAAAAGCCTTGAGAGTCTTGAATTGGGCAGATGTTCAATATTTGAATTGCCAAATGAAATCAAGGAACTAGAAAACTTGAGATTGCTGGAGATAGTAGGTTGTTTTATTGAAAGAAATAATCCTTTTGAAGTGATTGGAGGTTGCTTGCAATTAGAGGAGTTGTATTATGCCTCAAATAATATGCATGAAAATGCCGATGAGCCATCCTTAACTCAAATTACAACTCTCCCTGAATTGCAAAGTTATCATATAGCAGGATGGTGCAGTATTAGAAATTACAAAGTGGATTTTTCAATTTCTACCTATTTTGATTCAAAGGGCTTAAGAGTAAACTTCTCCAAAGAAATATTTAAATCCCTGGTGGCAAGGGCAGAAGTTGTGATGTTAGAAGGAGATTATTCTAACAGAGGATGGACAAATATTGTTCCTGACATCATATCTGTGCCAATCAACATAGATGATCACTTAATTAGGCTTCGTTTGGAATCTATGAATGAGATAAAGTGCCTAATCTATACACACCATCTTCGATCTAGTGTGACTATCTTCTCCAACTTGGTTGAGCTACATCTTGTGTCCATGGATGTGAGAGAACTATGTTGTGGTCCTTATCCTGTTGACTTTTTGAAGCAACTGAAGAAGCTGGAGTTATCAAGTTGTAAAAATCTGGAAGGCACGTTACTTGATGGCAAGCTTGAGCTGTGTAATCTAAAGTCCATGATTTTAAATGAATGTTCAATGACATGCCTTTTTCATCCATCCACAGCATTGAGTCTAAAACAACTAGAAAATTTGGATCTTGAAAAATGTTATAAGTTGGAATATATAGTAGCAGAGACGATGGACGATCATGATCTTAGTCAAAAGACTCTTGACTCGATGTTCCCTAAATTGAAACATCTCAAGCTCAGAGATAGTCCTGAATTAGAATTTATTTTTCCAATATGTTTTTGCAAAGACCTTCCACTACTAGAAACTATGAGAGTTGAAGATTGTGTGAATCTAAAACACATATTTGGGCAATATCCAGAGGAGAGAGATTTGCACCAAATTGAAAAAGAAGATGTCCTCCAGTTGCTGGAAAAAATGGAAATTTCCAGAGTACCAAATTTCATCAACATGTATGCAGAATGTTATCTCCCACGGCCTTGTTCTGATGAAGCGCAAAAATCATGTCAAAGTACAAAAGTGGAAGATGTTAGTAGCAGTTTATCAAGGGGTCATTTATGTTGTTTTTGGCCAAAATCAAATTCCTCAACTTTACATCACCCTTCTGCTTCCAAGATCACTCAACCAAACCATAATCAGGCAATAAAGGAGAATTTTGTTGTTAATAGAGCTCAAGGTCGACTTTTTACACCGCCATTGTATCCGAATAAAAGTTTGAAAAGAATGAAGATAGTTGCATTGTCTGGGTTGAATTCGCTCTTTACCCTATCCATTGCCTCAACATTGGAATTGCTGGAAGTATTGGAAGTCACAGATTGTGATACACTGGAGCAAATAGTAACATACGAGGTGCATGGTCTTGATCACATAAATGTTATCTCTATCTTCCCCAACTTACGGCAAGTTAATGTCTCTAATTGTAGCTACTTAGAATGTATATTCCCCGCTGTTTATTCAAAAGGCTTTAAAAAATTAGACTCTGTGAAGATCATCAAGGCTGAAAAGTTGACGCATGTGTTTGGAAAATGTCACGCTGATCAAAATCATAATGTTCAGGATGACCTTAATCTCCCAGCTCTGAAACAGCTTCACCTTGTTGATTTACCAAATATGATTAGTATTTGTGCTCAAAACTATTCTATGAAGGAATTATGCCTAGAAGATATTAGTTGGGGAGGATGTCCACAAATTCACTTTGAAACTTTACCAGACTTGTTGGTTGTTGACCATAAAAGTGAAGAAAATATTTCTAGGAGAAAGGCATTGTCTCTTGAGGAGAAAGGCAAACCACTTTCCAACTTGTATGAGTTTTCTGAGTTCAAGAAACCTAAAAGTCATATGAGCTTTCAAAATCTTTCCATGCTAAAACTTCAAGGATGCAAAACATTGAAATTTATTTCACCTGCATCCACGTCAAGAATGCTACAAAAGCTGGAAAAGTTAGAGGTATCAGACTGTGAAGAGCTAGTGAGCATTATTGAGGAGGAAGAAAATAGGAAAAATCCTATGGCTCCCCATCAAATATGTTTCCCAGAGCTACGTGGAATTATAGTGACAAATTGCAAAAGTTTGAAGTGCTTGTTCCCTATATCAAGTGGTAAGCTTCCACGGCTCTTGTATGTGAATATAGAAGATGCCCCTCAGCTTGGGGAAGTATTTGGATGGAACCAAAGAGAGGGAAAGAATCTAGTCAAGGAGGATGTGGCTCCAAGACTATATGGAATAAGACTAGTAAACCTACCAACTCTTCATACTATCTGTCAAGGAATTGATTTTCAGACTCTGAAAGTTCGACGTGTGCGTAAATGTCCAACTATTTCTTTAACCACGACACGATTTTATAAAGGTCCTCTAGCTTTGCTATCATTTTTTCATCGTGAAGATGAAGGCCGCTACTACAGAGATATTTTGCATTGGGATAGGAATAGGAAAGTATCAAAGGAGAGGATTGATAAAAAGGACAGCACACCACATAAACCAAATATTGATTTGCCAAATTTGACAGAGATTACAAATGCACCAGCAAATGAAATTGTTGCAGAAAAACTCTCTACAACTCTATCATCTAATTCAGACGTGAATCTCAAAGCAACTTCTGGTGAAGCTCCTTCTAAGGAGTTATGTGGAAAGGAATCAATGGGTGATGATCAACAAGCACTTGGAGAAATTAGAAGCTCTAATAATGAAGCTCCTCAAAGAGCTGAAGAACCTGCCAATAAATGTTCTTCCAAAGAAACATCAAATGAAATGGCATTGACGGTTCCACAATCTATTACTGGAATGACCCCTCCATTGATCTCTTCAATTCCTTCTCCCAAAAAGCGTCAAATAGCAACCTCATCTACTCACTTGGACTTGGAATCAAGGAGCTCTACTACTACCGATCAATCTGCAAAAAATTGCAAAGAAACTTCTAGTGAAGGTCCTTTACAAGAGAAACATGATGAAGCGAGTTTGTCAACTTATTCAGAATCGACAATTCAAAAGCCTAATGCATTAGCTCCTTCTAAGGAGTCGTTTGGAAAGGAATTAATGGCTAATGATCAACAAACACTTGGAGAAAGAAAAAGCTCCAATAATGAAGCCCCTCAAAGAGTTGAAGAACCTACCAGTAAATGTTCTTCCAAAGAAGCATCAAAAGAAATGGCATTGATGATTCTGCCATCTTCTACTAGAATGACCCCTCCATCAATCTCTTCAATTCCTTCTCCCAAAAAGCGTCAAATAGCATCTTCATCTACTGATGTGGAAATGGAATCAATGAGCTCTACTATTACTGATCAATCTGCACAAGATAAAATAATGAATCAACAGGAGACCTCCACTGAGAAACAAACCAAGTTTGACCGAGGAAACCATCAGCAATTTGTAGAAGATGATTTGATGAGATTGTTCCAAATAATGGAGGAAGGTGCTGAAATGGAAGTTTACATGCCTCATGTGTCCAAAATTGCAGCTTTTGAAGATGACAATGAGTTGAGTAAGGCTCTCGCCGACTTGGAAGCCTCATTGAAGATGAGTCTAAGTGAAATAGCTTGCTCTGAAGAAAGCAAACTTCGCCTTGAAAATTCTCTCAACATCTTATTCCCTTATTGTTCTGAAGATGGAACTCCCTCTCACGGCCTTCAAGCCACAATTCACTCTCTCCAACAAGAAATCCAAACTGTTCTATCTTCTTCCAGGCCCGCCTATGCCACCATTGACACATTCAACAAGCTTGAACAAAAAGAGAAGCTTCTCATTGAAGAACGGCCAAAGAGGAAGGAAGCAGCCATTGCCCTTCTGTCTAAAATTCACAATAAAGAGGGTTCTTTGGCCGAGGCTCAGCTACAGGAAGCAAAGTTAAAGGAGAAAATCTCTAAGCTTCAGGCTGAACTGTATAGCAAGGAAAAAGAAATCCAGGAGTATGAGATAGAACTTATATCTCTTAAAGAAGAGAAGAAGAAGAATGTTTATGACACAATGGGGTTTATAAAGGAGTATGAGGCTGTGAAGAAAGAAAGGCGTCACATAGAGGAAGAAAATATAAAAGCAAAGCAACACCTACAAAATATGGATGTTAAGTGGTCTTCTTGTCTATCCAATTTGAAAAAAACCACACTGCTGCTAGGAGTTCATCTTCAACAGAAGCTTTGA 6018 0.3757 MQELHYLCCYNSYVEDFENEKKHLRARRETIQKDIEEARNRNENQIESEVELWREEADRLIKEDTKGKEKWFGLVTNCFWQYNRGKDLKDKKQRIQQIVEQSNNFTRVARSTGLPGIEFYSFENFMQLKDRKLQFGKLTEALKNDKKFMIGLYGLGGTGKTTMAIEVCKEVAESKVFDKVIFSVVSKDANLKKIRDNIAKHLNFPLNEGTNDSEQKLQLWKRIAEGGEKVLLILDDVCEKLSLQDIGIPLGRHGKSSCSMLITTRDWRVCRDMGCHETIELEVLNEKDAVDLFLSYADKSTDSSSNGFKDVALGIVKECGRLPVAIVAVARALKSKPLKEWKHGLERLQNLESVHDVKEDLKEAYNSLRISYDHLKNKKAKQLFLLCALFPEDYEIPIELLTRIAIGLELCGGANIYSSARSHFTPIKNDLIDSCLLLKASDEYVKMHDLVREVALWIGNKQVQVAMDSNTTLMDGIQYSSWNVIDFPSHLDGRKLEVLLVWINSASSSSMKVPNAYFEGMENLKILAIMSQSRLRISAASLFQSPLSLINVRTLSIQEFALGDISLLVNLKSLESLELGRCSIFELPNEIKELENLRLLEIVGCFIERNNPFEVIGGCLQLEELYYASNNMHENADEPSLTQITTLPELQSYHIAGWCSIRNYKVDFSISTYFDSKGLRVNFSKEIFKSLVARAEVVMLEGDYSNRGWTNIVPDIISVPINIDDHLIRLRLESMNEIKCLIYTHHLRSSVTIFSNLVELHLVSMDVRELCCGPYPVDFLKQLKKLELSSCKNLEGTLLDGKLELCNLKSMILNECSMTCLFHPSTALSLKQLENLDLEKCYKLEYIVAETMDDHDLSQKTLDSMFPKLKHLKLRDSPELEFIFPICFCKDLPLLETMRVEDCVNLKHIFGQYPEERDLHQIEKEDVLQLLEKMEISRVPNFINMYAECYLPRPCSDEAQKSCQSTKVEDVSSSLSRGHLCCFWPKSNSSTLHHPSASKITQPNHNQAIKENFVVNRAQGRLFTPPLYPNKSLKRMKIVALSGLNSLFTLSIASTLELLEVLEVTDCDTLEQIVTYEVHGLDHINVISIFPNLRQVNVSNCSYLECIFPAVYSKGFKKLDSVKIIKAEKLTHVFGKCHADQNHNVQDDLNLPALKQLHLVDLPNMISICAQNYSMKELCLEDISWGGCPQIHFETLPDLLVVDHKSEENISRRKALSLEEKGKPLSNLYEFSEFKKPKSHMSFQNLSMLKLQGCKTLKFISPASTSRMLQKLEKLEVSDCEELVSIIEEEENRKNPMAPHQICFPELRGIIVTNCKSLKCLFPISSGKLPRLLYVNIEDAPQLGEVFGWNQREGKNLVKEDVAPRLYGIRLVNLPTLHTICQGIDFQTLKVRRVRKCPTISLTTTRFYKGPLALLSFFHREDEGRYYRDILHWDRNRKVSKERIDKKDSTPHKPNIDLPNLTEITNAPANEIVAEKLSTTLSSNSDVNLKATSGEAPSKELCGKESMGDDQQALGEIRSSNNEAPQRAEEPANKCSSKETSNEMALTVPQSITGMTPPLISSIPSPKKRQIATSSTHLDLESRSSTTTDQSAKNCKETSSEGPLQEKHDEASLSTYSESTIQKPNALAPSKESFGKELMANDQQTLGERKSSNNEAPQRVEEPTSKCSSKEASKEMALMILPSSTRMTPPSISSIPSPKKRQIASSSTDVEMESMSSTITDQSAQDKIMNQQETSTEKQTKFDRGNHQQFVEDDLMRLFQIMEEGAEMEVYMPHVSKIAAFEDDNELSKALADLEASLKMSLSEIACSEESKLRLENSLNILFPYCSEDGTPSHGLQATIHSLQQEIQTVLSSSRPAYATIDTFNKLEQKEKLLIEERPKRKEAAIALLSKIHNKEGSLAEAQLQEAKLKEKISKLQAELYSKEKEIQEYEIELISLKEEKKKNVYDTMGFIKEYEAVKKERRHIEEENIKAKQHLQNMDVKWSSCLSNLKKTTLLLGVHLQQKL 2005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1939 2005 Coils Coil 1955 1975 - -
Alju04g1939 2005 Coils Coil 1892 1940 - -
Alju04g1939 2005 Gene3D Ribonuclease Inhibitor 455 666 IPR032675 -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1513 1527 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1440 1463 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1535 1560 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1684 1736 - -
Alju04g1939 2005 Gene3D - 123 283 IPR027417 -
Alju04g1939 2005 Coils Coil 358 378 - -
Alju04g1939 2005 SUPERFAMILY RNI-like 1033 1348 - -
Alju04g1939 2005 Gene3D - 371 454 IPR036388 -
Alju04g1939 2005 Gene3D - 284 370 IPR042197 -
Alju04g1939 2005 PRINTS Disease resistance protein signature 319 333 - -
Alju04g1939 2005 PRINTS Disease resistance protein signature 224 238 - -
Alju04g1939 2005 PRINTS Disease resistance protein signature 778 794 - -
Alju04g1939 2005 PRINTS Disease resistance protein signature 149 164 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1637 1663 - -
Alju04g1939 2005 Coils Coil 14 63 - -
Alju04g1939 2005 Pfam NB-ARC domain 137 373 IPR002182 GO:0043531
Alju04g1939 2005 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1118 1398 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1566 1599 - -
Alju04g1939 2005 Gene3D Ribonuclease Inhibitor 725 934 IPR032675 -
Alju04g1939 2005 Gene3D Ribonuclease Inhibitor 1021 1221 IPR032675 -
Alju04g1939 2005 Gene3D Ribonuclease Inhibitor 1223 1353 IPR032675 -
Alju04g1939 2005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 387 IPR027417 -
Alju04g1939 2005 SUPERFAMILY L domain-like 446 1112 - -
Alju04g1939 2005 MobiDBLite consensus disorder prediction 1487 1744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1939 Alju-ChrAlju04 49886913 49896236 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1939 150 464 WRKY Transcription Factor Family AT5G45050 26.019 6.91e-11 65.9