Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1924 ATGGCGGAGCGAGCTTCTTATGGTGCGGGTCATCATCGATTAGATCTTGAGCAACTACAATTAGAAGCCCAGCATCGGTGGTTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAATTATCGGATGTTTCAAATTACTTCAGAACCCCCGAACAGGCCCCCAAGCGGTTCACTTTTTCTGTTTGATCGGAAAGTGTTGAGATATTTTAGAAAGGATGCACATAATTGGAGGAAGAAAAAAGACGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTGCATTGCTACTATGCTCATGGGGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACCGGACATGATGCACATAGTTTTTGTCCACTACTTGGAAGTAAAGGGTAATAAAACTAATATTGTGGGAAATACAGATAGTGACGAGGTTACGTCAGGAAATAGCAGATCTCCATCTCCATCATCTGGTTTTCCTATTAATTATGGTAATATGCCTTCAAGAAGCACAGATGCCATGAGCCCAACTAGCACTTTATCTTCGTTATGTGAAGATGCTGATTCAGGTGATCATGGACAGCCATCAGTTTCTGGAACAAATTATATCCCACTTGTTCAGGGAGATAAAACCAGAGGAAGCAATGCCTCCTTTGTCGAGGGCCAAAATGTTCAGGACATGGCCTCCTGGGACACTGTATTGGACCGATGTACTGCTGGATTACATACTGATCCAAATCTTGCATCATTTGCCTCTGTCCCACCATATTCAGTTGGGAACATTCTTAAACAAGAACCTGCTCTGGGTAACCTAGCTGTTGGGAACATTCTTAAACAAGAACATGCTCTGGGTAACCTAGCTGAGGAGGCAGGGAAATCTCAGTCTTTTCACTCAGATTGGCAGATTCCTTTTGATGACAATTCAGGACAGTTGCATAAATGGCCAATAGCCCAATTGTTGAGTTCTGAATATGGATCTGATTTTACCACTGGTTTACTAGGGAATGAATCTCATAATGCAGGTCCTGAGATTGCTTCTGGCCTGTTGACTTTTAATGGTCAGTCAAGAGAACAGCCTTTGCAGGAAAACTTTTCAGAACAGCATACAGATGCACAATATCAATTTTCTCTGAAACCTAGTTCTGAGAATGAGAATGCTTTCGTTATGAAACGCCCATTATTAGAGGGAAATGATAGCCTGAAGAAAGTTGACAGCTTTTCCCGATGGGTTAGTAGAGAACTTCCAGAGGTGGATGATCTACGTATGCAATCCTCGTCTGGTATTTCATGGAGCACAGATGAATGTGGGCAAGTTATCGATGATTCTTCACTTAGTCCCTCCCTCTCTCATGACCAGCTGTTCAGCATATACAATTTTTCACCTAAATGGGCTTATGCTGATTCTGAAACTGAGGTTTTGATCATTGGAACGTTTTTGAAGAATCAACCAGGGGTGGCAAACTGCAACTGGTCTTGCATGTTTGGGGAAGTTGAAGTTCCTGCTGAGATTTTAGCCAATGGAGTTTTGTGTTGTCTTGCTCCACCTCATAAGGCTGGAAGGTTCCCCTTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGAGGGAATTTGATTACAGAGAGGGCTTTGCCAAGGATGTAGAAGTTGAAGATATTTACTGCAGTTCGTTTGAAATGCTATTCTATTTGCGATTGGAAGCATTACTTTCTTCAAAATCATTGTGCCCTTCAAATGACCAGTCACTTGATGATGATACAGAGAAAAGAAGCTTGATATATAAGCTTGTTTCATTGAGGGAAGAAGATGAGTATTTAAATAAGGAAGAGTCGACGTTAGATGTGGACATGTCCCAGCAGAAGGTAAAGGAGCAGCAATTTCAAAGACAAGTGAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTAAAGGGCCAAATGTATTAGATGAGGAGGGACAGGGTGTGCTACATCTAACAGCTGCTCTTGGTTATGATTGGACCATAGCGCCAATTATTATTTCTGGAGTTAATATCAATTTCCGTGACGTAAATGGATGGACGGCTCTGCATTGGGCTGCCTCTTGTGGCAGAGAGCGGACAGTTGCTCTCCTTGTCACTATGGGTGCAAATCCTGGAGCATTGACTGATCCATCACCAGAATTTCCTTCGGGTAGAACACCGGCAGATCTTGCTTCTAGGAATGGACACAAGGGAATCTCAGGCTTTCTTGCAGAGTGCTTATTAACTGACCACCTTGGACTTCTCACAATGGATGAGCAAAAGAGAGATGGTGGTCAAGAGGCTTCAGGAGTGAAAGCAGTGCATACTGTTTCAGAGCGTTCTGCGACACCTTTGTTTTATGGTGATATGCCCGATGCCCTATGCCTTAAGGATTCTCTCACTGCTGTTCGTAATGCCACACAGGCAGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTCCAAAGGAAGCAGTTGAATGAGTACCCGGATGATGAGTTTGGACTGTCAGATCCACGAGCTCTTTCTCTTCTAGGTTCCAAGGCAGGCAAGGCTGGACAGGGAGATGGGTTAGCCCATGCTGCAGCAACACAAATACAGAAGAAGTTCCGTGGCTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAGTTGTTAAAATCCAGGCTCATGTAAGAGGGCACCAGGTAAGGAAGCAATACAAGTCAATCATCTGGTCTGTAGGAATCCTGGAGAAGGTCATATTGCGTTGGAGACGCAAGGGAAGTGGCTTACGTGGGTTTCGACCAGATGCTGCTGCTGCTGCGGCTGCAAACAAGGAACCCAGCCAACCAAGTGAACCTTTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAGGTTCCAGAAGGCCCTTTCGAGGGTAAAGTCCATGGTTCAGTATCCTGAAGCACGGGCTCAATATCGACGGCTGCTAAATGTTGTTGAGGACTTCCGTCAGACTAAGTCTGGCAATATGGACTTGACCAATTCGGAGGAGACTGTTGATGGTGTTGAGCAGTTGATTGATATTGACATGCTTTTAGATGATAATTTCATACCTATAGCATTTGATTGA 3162 0.4352 MAERASYGAGHHRLDLEQLQLEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDAHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEPDMMHIVFVHYLEVKGNKTNIVGNTDSDEVTSGNSRSPSPSSGFPINYGNMPSRSTDAMSPTSTLSSLCEDADSGDHGQPSVSGTNYIPLVQGDKTRGSNASFVEGQNVQDMASWDTVLDRCTAGLHTDPNLASFASVPPYSVGNILKQEPALGNLAVGNILKQEHALGNLAEEAGKSQSFHSDWQIPFDDNSGQLHKWPIAQLLSSEYGSDFTTGLLGNESHNAGPEIASGLLTFNGQSREQPLQENFSEQHTDAQYQFSLKPSSENENAFVMKRPLLEGNDSLKKVDSFSRWVSRELPEVDDLRMQSSSGISWSTDECGQVIDDSSLSPSLSHDQLFSIYNFSPKWAYADSETEVLIIGTFLKNQPGVANCNWSCMFGEVEVPAEILANGVLCCLAPPHKAGRFPFYVTCSNRLACSEVREFDYREGFAKDVEVEDIYCSSFEMLFYLRLEALLSSKSLCPSNDQSLDDDTEKRSLIYKLVSLREEDEYLNKEESTLDVDMSQQKVKEQQFQRQVKEKLYSWLLHKVAEDGKGPNVLDEEGQGVLHLTAALGYDWTIAPIIISGVNINFRDVNGWTALHWAASCGRERTVALLVTMGANPGALTDPSPEFPSGRTPADLASRNGHKGISGFLAECLLTDHLGLLTMDEQKRDGGQEASGVKAVHTVSERSATPLFYGDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLNEYPDDEFGLSDPRALSLLGSKAGKAGQGDGLAHAAATQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAAAAAAANKEPSQPSEPLKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKSGNMDLTNSEETVDGVEQLIDIDMLLDDNFIPIAFD 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1924 1053 FunFam Calmodulin-binding transcription activator 2 872 920 - -
Alju04g1924 1053 ProSiteProfiles IQ motif profile. 896 920 IPR000048 GO:0005515
Alju04g1924 1053 SMART ANK_2a 736 765 IPR002110 GO:0005515
Alju04g1924 1053 SMART ANK_2a 697 726 IPR002110 GO:0005515
Alju04g1924 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 923 IPR027417 -
Alju04g1924 1053 Pfam IPT/TIG domain 463 541 IPR002909 -
Alju04g1924 1053 Pfam IQ calmodulin-binding motif 898 917 IPR000048 GO:0005515
Alju04g1924 1053 Pfam IQ calmodulin-binding motif 874 893 IPR000048 GO:0005515
Alju04g1924 1053 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Alju04g1924 1053 Gene3D - 623 765 IPR036770 -
Alju04g1924 1053 ProSiteProfiles Ankyrin repeat profile. 697 729 IPR002110 GO:0005515
Alju04g1924 1053 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 1016 - -
Alju04g1924 1053 ProSiteProfiles Ankyrin repeat region circular profile. 697 723 - -
Alju04g1924 1053 MobiDBLite consensus disorder prediction 145 211 - -
Alju04g1924 1053 ProSiteProfiles IQ motif profile. 873 902 IPR000048 GO:0005515
Alju04g1924 1053 FunFam Calmodulin-binding transcription activator 2 456 552 - -
Alju04g1924 1053 SMART iq_5 895 917 IPR000048 GO:0005515
Alju04g1924 1053 SMART iq_5 872 894 IPR000048 GO:0005515
Alju04g1924 1053 Pfam Ankyrin repeats (3 copies) 669 757 IPR002110 GO:0005515
Alju04g1924 1053 MobiDBLite consensus disorder prediction 145 192 - -
Alju04g1924 1053 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Alju04g1924 1053 SUPERFAMILY E set domains 463 549 IPR014756 -
Alju04g1924 1053 Gene3D Immunoglobulins 456 551 IPR013783 -
Alju04g1924 1053 Gene3D - 873 920 - -
Alju04g1924 1053 SMART CG_1_2 19 137 IPR005559 GO:0003677
Alju04g1924 1053 SUPERFAMILY Ankyrin repeat 654 757 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1924 Alju-ChrAlju04 49502424 49514355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1924 1 1035 CAMTA Transcription Factor Family AT5G64220 52.210 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Alju04g1924 CG-1 4.1e-50 No_clan