Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1912 ATGGCTTCCCTTCATCCTCCATATCCATCAGGAGCCTGTGATTGTGAAGCTGGTCAAAGCTTTCGAGCTGGTGGTGGAAGAGGGCTAGAGATTGAAACGACGACGTTAGGTGTGGAAGAAACAACAAGAAGGAAGAAGAGGAGTGATGAAATGGATGGAGGAGAAGAGAAGGGGATATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTAATACAATTGGGAAGAAGAAGAAGAAAGAGAATATTAATAATGGGAATGGAAGCAGAAGAACAATACTTGAAGGTCTGAGTGGTTATGCAAAACCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAATACAAGACAAGCAGGGGAAATTCTTATTAATGGCCACAAACAAGCACTTGCTTATGGGACATCGGCATATGTGACACAAGATGACACTTTACTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCTCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAGAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGTCTACAAGACGCCATTAACACCAGAATTGGAGGTTGGGGCTGTAAGGGAATAAGTGGAGGCCAAAAGAGAAGAGTGAGTATCTGCATAGAGATCTTGACACGTCCAAGGCTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTGATGAGCCGAATCGCAAGCCTCGATCGAAAGGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAGATCTTTGATAATCTTTGTCTTCTTTCCTCTGGAAGAACTGTGTTCTTTGGTCCTGCTTCTGAAGCAAGTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCTGCTCTCCAAAATCCATCGGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATAATCAGGACATTGAAATGGGCTTAGCTGGCACTCAAAGGAAACCTACAGAAGAAGCAATCGAAATTCTTGTCAAGTCGTACAAGTCTTCTGATCTGAACCAGCAAGTTCAAGCAGAAGTAGCAGCATTATCTACACAGGGAAATGGAATGGTGGAGAAGAAGAAGAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACAAAGAGATCATTCGTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTCATATACGTCGCTGTGGCTCTAGGTTTGGGCACTGTGTTCTATGATCTGGGCATGAGCGAGGGGTCTATTAAAGATAGAGCTGCACTTCTTGCGTTTGTTTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCCTCCTTCGTTGAAGATATGAAGGTATTTCAAAGGGAAAGGCTAAATGGGCACTATGGAGTGACAGCTTATGTGATAGGAAACACCTTATCTTCAATCCCATACCTATTACTCGCCACTCTAATTCCTGGAGCCATAGCCTATTACCTCCCAGGCCTTCAAAAAACTGCTGAACACTTCATCTTCTTCTGCTGCGTCCTTTATTCATGTCTGATGCTAGTTGAAAGCCTGATGATGATAGTGGCCAGCATAGTCCCTAACTTCCTCATGGGAATCATTACTGGTGCTGGTCTTCAAGGCATCATGTTGCTCGCCGGCGGCTTCTTTAGATTGCCCAATGACCTCCCCAGAATATTTTGGAAGTATCCTCTCCACTTCGTCGCCTTCCATAGATATGTCTACCAAGGTCTGTTCAAGAATGAGTATGAAGGACTCAAGCTTGGTGGTAAAAGTGGGGAATATATTCTAAGAAGGATATGGCAAGTTAACATGAGTTATTCTAAGTGGGTTGATCTTGCAATTCTTCTGGGGATTATTGTTGTGTATAGAGTTTTGTTCTTGGTGACCATCAAAGGAACTGAGAAGATGAAGCCCTTGGTTTCTTCTTTGTTTTCTGGGCCTCCTAAGAGAAGCATTCAGGTCATGGTCAATCCATATGCTACTCCTTTAAATGAAGGGGCAACATAA 2100 0.4357 MASLHPPYPSGACDCEAGQSFRAGGGRGLEIETTTLGVEETTRRKKRSDEMDGGEEKGIWLTWKDVWVTASNTIGKKKKKENINNGNGSRRTILEGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQIFDNLCLLSSGRTVFFGPASEASEFFASNGFPCPALQNPSDHFLKTINKDFDDNQDIEMGLAGTQRKPTEEAIEILVKSYKSSDLNQQVQAEVAALSTQGNGMVEKKKRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLGTVFYDLGMSEGSIKDRAALLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLLLATLIPGAIAYYLPGLQKTAEHFIFFCCVLYSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMLLAGGFFRLPNDLPRIFWKYPLHFVAFHRYVYQGLFKNEYEGLKLGGKSGEYILRRIWQVNMSYSKWVDLAILLGIIVVYRVLFLVTIKGTEKMKPLVSSLFSGPPKRSIQVMVNPYATPLNEGAT 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1912 699 Pfam ABC-2 type transporter 401 613 IPR013525 GO:0016020|GO:0140359
Alju04g1912 699 Pfam ABC transporter 95 245 IPR003439 GO:0005524
Alju04g1912 699 FunFam ABC transporter G family member 11 59 364 - -
Alju04g1912 699 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524|GO:0016887
Alju04g1912 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 320 IPR003439 GO:0005524
Alju04g1912 699 Gene3D - 77 315 IPR027417 -
Alju04g1912 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 50 674 - -
Alju04g1912 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 311 IPR027417 -
Alju04g1912 699 SMART AAA_5 103 297 IPR003593 GO:0016887
Alju04g1912 699 Pfam ABC-2 type transporter 277 344 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1912 Alju-ChrAlju04 49225173 49231971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1912 93 289 Calmodulin-binding Proteins AT2G36910 29.469 1.05e-09 60.1