Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1910 ATGATCTTGCTTCTTCTTTCACTCTTCTGCTTTTTTCCAGATAAAACCATGAGGCCGATTTTGATGAAGGGCCACGAGAGGCCACTGACGTTTCTCAAGTACAACAGAGATGGAGATCTTCTTTTCTCTTGTGCTAAGGATCACAATCCCACCGTCTGGTTCGCGGATAACGGTGAACGCTTGGGCACTTATCGTGGACACAACGGCGCCGTTTGGTGCTGTGATGTCTCAAGAGAGTCGATGCGGCTTATAACAGGAAGTGCGGATCAGACGGCAAAGCTATGGAATGTTCAAACCGGGCAGCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTGGATTTTTCCGTGGGTGACAAACTTGCTGTTATTACAACTGATCCCTTCATGGAATTGTCTTCTGCAATTCATGTCAAACGCATTGCTAGAGACACCAGTGACCAGACTGGCGAATCTATACTTGTCATTAAAGGCCCTCAGGGAAGAATAAATAGAGCCATTTGGGGGCCACTAAACAAAACTATTATTAGTGCTGGAGAAGATGCAGTTATCCGTATATGGGATTCTGAGACAGGAAAGCTACTTAAGGAGGCTGACAAGGAATCTGGCCACAAGAAGACAATAACATCTCTTGCAAAATCCGCTGATGGCTCCCATTTCCTGACTGGCTCCCTTGATAAATCGGCCAAGCTATGGGATGCCAGATCATTGTCTCTTATCAAGACATATGTAACTGAACGCCCAGTCAACGCAGTGGCCATGTCACCTCTTCTTGACCATGTGGTGCTTGGAGGTGGTCAAGATGCATCAGCTGTTACTACTACTGATCATCGTGCTGGAAAATTTGAAGCCAAGTTTTTTGACAAGGTTCTTCAAGAAGAAATTGGGGGTGTGAAGGGACATTTCGGACCAATCAATGCACTTGCCTTTAATCCTGATGGCAAGAGCTTTTCAAGTGGAGGTGAAGATGGTTATGTGAGGTTGCATCACTTCGACCCAGATTACTTCAATATTAAAATTTAG 1029 0.45 MILLLLSLFCFFPDKTMRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRESMRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELSSAIHVKRIARDTSDQTGESILVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKEADKESGHKKTITSLAKSADGSHFLTGSLDKSAKLWDARSLSLIKTYVTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKVLQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1910 342 ProSitePatterns Trp-Asp (WD) repeats signature. 83 97 IPR019775 -
Alju04g1910 342 PRINTS G protein beta WD-40 repeat signature 83 97 IPR020472 -
Alju04g1910 342 PRINTS G protein beta WD-40 repeat signature 177 191 IPR020472 -
Alju04g1910 342 PRINTS G protein beta WD-40 repeat signature 222 236 IPR020472 -
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 64 101 - -
Alju04g1910 342 SUPERFAMILY WD40 repeat-like 16 330 IPR036322 GO:0005515
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 158 195 - -
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats profile. 22 63 IPR001680 GO:0005515
Alju04g1910 342 Pfam WD domain, G-beta repeat 59 96 IPR001680 GO:0005515
Alju04g1910 342 Pfam WD domain, G-beta repeat 204 235 IPR001680 GO:0005515
Alju04g1910 342 Pfam WD domain, G-beta repeat 299 330 IPR001680 GO:0005515
Alju04g1910 342 Gene3D - 17 342 IPR015943 GO:0005515
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats profile. 300 330 IPR001680 GO:0005515
Alju04g1910 342 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 17 342 IPR027525 GO:0003743|GO:0005737|GO:0005852
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats profile. 158 199 IPR001680 GO:0005515
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 238 - -
Alju04g1910 342 SMART WD40_4 193 235 IPR001680 GO:0005515
Alju04g1910 342 SMART WD40_4 15 54 IPR001680 GO:0005515
Alju04g1910 342 SMART WD40_4 151 190 IPR001680 GO:0005515
Alju04g1910 342 SMART WD40_4 293 332 IPR001680 GO:0005515
Alju04g1910 342 SMART WD40_4 57 96 IPR001680 GO:0005515
Alju04g1910 342 SMART WD40_4 238 277 IPR001680 GO:0005515
Alju04g1910 342 ProSitePatterns Trp-Asp (WD) repeats signature. 177 191 IPR019775 -
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 300 330 - -
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 244 IPR001680 GO:0005515
Alju04g1910 342 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 17 341 - -
Alju04g1910 342 ProSiteProfiles Trp-Asp (WD) repeats profile. 64 105 IPR001680 GO:0005515
Alju04g1910 342 CDD WD40 23 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1910 Alju-ChrAlju04 49196228 49199282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1910 17 342 Eukaryotic Initiation Factors Gene Family AT2G46290 80.793 0.0 563