Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1908 ATGAAGTTCAACATTGCGAATCCCACCACTGGATGCCAGAAGAAGCTTGAGATCGATGACGATCAGAAGCTACGAGCTTTCTGGGACAAGCGTATCTCACAGGAGGTTAGCGGTGATGCTCTGGGTGAGGAATTCAAAGGCTATGTCTTCAAGATCACTGGTGGTTGTGACAAACAAGGTTTTCCAATGAAGCAAGGAGTGCTGACCCCTGGTCGTGTTCGTCTCTTGCTCCACAGAGGAACTCCTTGCTTCCGTGGATATGGAAGGCGCAATGGTGAGCGCAGGAGAAAATCTGTGCGTGGGTGCATTGTGAGCCCAGACCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGATTTGCCTGGACTCACTGACATTGAGAAGCCAAGGATGAGAGGTCCTAAGAGAGCATCCAAAATCCGCAAGCTCTTCAACCTTTCCAAGGAGGATGATGTGAGGAAGTATGTCAACACCTATCGTCGCACCTTCACAACAAAATCTGGCAAAAAGGTGAGCAAGGCTCCTAAGATACAAAGACTGGTCACACCTTTGACCCTCCAAAGAAAGCGTGCAAGGATTGCACAGAAGAAGAAGAGAATCGCCAAGGCCAAGTCAGAAGCAGCTGAGTACCAGAAACTTCTTGCCTCAAGGTTGAAGGAGCAGAGGGAGCGCAGGAGTGAGAGTCTGGCCAAGAGGAGGTCCAAGCTCTCTAGCGCTAAGCAATCCATCGCGGCATAG 747 0.4967 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIAQKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSAKQSIAA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1908 248 Coils Coil 189 216 - -
Alju04g1908 248 MobiDBLite consensus disorder prediction 222 237 - -
Alju04g1908 248 MobiDBLite consensus disorder prediction 222 248 - -
Alju04g1908 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Alju04g1908 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Alju04g1908 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Alju04g1908 248 Gene3D - 133 234 - -
Alju04g1908 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Alju04g1908 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1908 Alju-ChrAlju04 49187769 49190122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1908 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.140 1.62e-119 337