Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1905 ATGGCACAATATCTTCAGCTTCACTTGGCAAGCTGGGTTTTCACAAATCTTCTGCTTCTTCTGTTTCTGTTTAGAAACGCAGATTGTGGCCACATAGTCAAGTCTCTTCCTGGCTTTCCTGGTGTACTCCCTTTCAAACTTGAATCTGGATATATAGGGGTGGAGCAGTCAGAACTGTACTATCTGTTTGTGGAATCTACTGGGCATCCAAAAACTGATCCTCTTCTTGTATACTTAGTGGGAGGACCTGGTTGTTCTGGTTTTAATGGATTCTTCTACCAAACTGGTCCATTGGCTTTTAATGATTCACACTATAATGGGGGTTTGCCAGAGTTATACTTGAGACCTTATCCATGGACAAAGACTGCTAGCATCAGATATCTAGACGCACCTGTTGGCACTGGATACTCATATGCTACAGAGCCTGAAGGTTTGGTGTCTGATGACACTTCATCAGCAAGACAAACTTACAAGTTCTTAAGGAAGTGGTTGGGAGAACATCCTGAGTACATGAACAATCGGCTGTTCTTAGCAAGTGATTCATTTAGTGCCATAGTTGTGCCACTCATTGTTCAGCATATATTATATGATAATGAAGCTGGAATATTGCCACACTTAAAGTTAATAGGATTTATAAGTGGGTCTCCACATCAAGGAACTGAGCTAGAAAAAAATGGACAAATGGAGGTAGCTTTCAGACTGGGACTTATAGGAAACAAACTATATCAGAGAGCCAAAGAAAGCTGCAATGGACAGTATTATATAGTGGACCCCTCTAATACGGAATGTAAAGAAGCACTTGGAAAGATTGATGAGCTGCTGAATGATATATATTATGAGAATGTTTTGGGCCCAAAGTGTGTGACTGTTTCACCAAAATCAGAAGAAGATGAGACTCAATCTAGGGGAAGAAGAAGTCTGCAAGGAGAGAAATCAAGACTTTTCTCTAGCTTATCTCATCCACAATGGTATTGCAAGAATTCTGCTTATGTACTTTCATATGAATGGGCAAATAATGAGACTGTTAAAGAAGCACTTCATATCAGAGAGGGAACAGTGAGGAAGTGGTACAGATGCAATCTTATGCTAAAGGATCTATACACTGATAATATTGATTCTGCCTTCAGCTACCAGAAGAGTTTTACCACAACAGATTTACAAGTCTTGCTTTATACGGGTGATCATGACCTTGTTATCCCACATGTAGCTACAGAACAATGGATAAAGGACCTTAATATAACTGAAGAGTATTCTTGGCGTCCTTGGTTTGTGGATGGTCAGGTTGCAGGGTACAAAATTATATACCAGAATTATGCATACCGCTTAACATATGTAACTTTCAAGGGTTCAGGGCATTCTCCCACAGAGTACTACAATCAAAGAGCCTATGAAATGTTTGCAAGGTGGATCCATTTTTATCCTGTCTAA 1428 0.3985 MAQYLQLHLASWVFTNLLLLLFLFRNADCGHIVKSLPGFPGVLPFKLESGYIGVEQSELYYLFVESTGHPKTDPLLVYLVGGPGCSGFNGFFYQTGPLAFNDSHYNGGLPELYLRPYPWTKTASIRYLDAPVGTGYSYATEPEGLVSDDTSSARQTYKFLRKWLGEHPEYMNNRLFLASDSFSAIVVPLIVQHILYDNEAGILPHLKLIGFISGSPHQGTELEKNGQMEVAFRLGLIGNKLYQRAKESCNGQYYIVDPSNTECKEALGKIDELLNDIYYENVLGPKCVTVSPKSEEDETQSRGRRSLQGEKSRLFSSLSHPQWYCKNSAYVLSYEWANNETVKEALHIREGTVRKWYRCNLMLKDLYTDNIDSAFSYQKSFTTTDLQVLLYTGDHDLVIPHVATEQWIKDLNITEEYSWRPWFVDGQVAGYKIIYQNYAYRLTYVTFKGSGHSPTEYYNQRAYEMFARWIHFYPV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1905 475 SUPERFAMILY alpha/beta-Hydrolases 33 471 IPR029058 -
Alju04g1905 475 Pfam Serine carboxypeptidase 37 471 IPR001563 GO:0004185|GO:0006508
Alju04g1905 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 455 IPR001563 GO:0004185|GO:0006508
Alju04g1905 475 Gene3D - 324 473 - -
Alju04g1905 475 FunFam Carboxypeptidase 323 475 - -
Alju04g1905 475 Gene3D alpha/beta hydrolase 27 296 IPR029058 -
Alju04g1905 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Alju04g1905 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Alju04g1905 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Alju04g1905 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1905 Alju-ChrAlju04 49149139 49156694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1905 289 475 Calmodulin-binding Proteins AT2G22960 35.638 1.36e-34 126