Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1904 ATGGGACCAAATCTTCAGCTTCACTTATTAGCTAGCTGGGTTTTCACAAATCTTCTGCTTCTTCTGTTTCTGCATAGAAATGCAGATTGTGGTCACATAGTCAAGTCTCTTCCTGGCTTTGCTGGTGAACTCCCTTTCAAACTAGAATCTGGATATATAGGGTTGGAGCAGTCAGAACTGTACTATCTGTTTGTGGAATCCACTGGGCATCCAAAAACTGATCCTCTTTTGCTATACTTAGTGGGAGGTCCTGGTTGTTCTGGTTTTAATGGATTCTTCTACCAAACTGGTCCACTGGCTTTCAATGAGTCATACTATAATGGAGGTTTTCCAGAGTTATATTTGAGACCTTATCCGTGGACAAAGACTGCTAGCATTATATTTCTAGATGCACCTGTGGGCACTGGATTCTCATATGCCAAGGACCCACAAGATTTGGTTGTATCAGACACATCATCAGCAAGACAAACTTACAAGTTCTTAAGAAAGTGGCTGGCAGAACACCCTGAGTACATGAACAATCGGCTGTTCATAGCAAGTGATTCATATAGTGGCCTAGTTGTGCCACTCATTGTTCAACATATATTAGATGATAATGATGCTGGAATATTGCCACACTTGAAGTTAATAGGATTCATAAGTGGGTCTCCACATCAAGGTACTGAGTTAGAACAAAATACAAAAATAGAGGTAGCTTACAGATTGGGACTTATAGCAAACAAGCAATACCAGAGAGCCAAAGAGAGCTGCAATGGACAGTATTATATAGTGGAGCCCTCTAATACGGAATGTAAAGAAGCACTTGGAAAAATTGATGAGCTGCTGAATGATATATATACTGAGAATGTTTTGTACCCACAGTGTGTGAATGTTTCACCAAAACCAGATGAAGATGAGAGTCACTCTGTAAGAATAAGTCTGCAAGTAGAGAAATCAAGACATTTCTATGGCCTATCTCCTCCACAATGGTATTGCAAGAATTCTGCTTATGTACTTTCATATGCATGGGCAAATAATGAGACTGTCAAAGAAGCACTTCACATCAGAGAGGGAACCGTAGAGAAGTGGTACAGATGCAATCTTGTCCAGCAGGATCTATACAATCATAATATTGAATCTGTCTTCAGCTACCAAAAGAATTTTACTAAAACAGATTTACAAGTCTTGCTTTATTCGGGTGATCATGACCTTGTTGTCCCACATTTAGCCACAGAACAATGGCTAAAGGACCTTAATATCACTGAAGAGTATTCTTGGCGTCCGTGGTTTGTGGATGGTCAGGTTGCAGGGTACAAAGTTATATATCAGAATTATGCATATAGCTTGACATACTTAACTTTCAAGGGTTCAGGGCATTCTCCCACAGAGTACTACAATCAAAGAGCCTATGAAATGTTTGCAAGGTGGATCCACTTTTATCCTGTCTAA 1428 0.3985 MGPNLQLHLLASWVFTNLLLLLFLHRNADCGHIVKSLPGFAGELPFKLESGYIGLEQSELYYLFVESTGHPKTDPLLLYLVGGPGCSGFNGFFYQTGPLAFNESYYNGGFPELYLRPYPWTKTASIIFLDAPVGTGFSYAKDPQDLVVSDTSSARQTYKFLRKWLAEHPEYMNNRLFIASDSYSGLVVPLIVQHILDDNDAGILPHLKLIGFISGSPHQGTELEQNTKIEVAYRLGLIANKQYQRAKESCNGQYYIVEPSNTECKEALGKIDELLNDIYTENVLYPQCVNVSPKPDEDESHSVRISLQVEKSRHFYGLSPPQWYCKNSAYVLSYAWANNETVKEALHIREGTVEKWYRCNLVQQDLYNHNIESVFSYQKNFTKTDLQVLLYSGDHDLVVPHLATEQWLKDLNITEEYSWRPWFVDGQVAGYKVIYQNYAYSLTYLTFKGSGHSPTEYYNQRAYEMFARWIHFYPV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1904 475 Pfam Serine carboxypeptidase 38 471 IPR001563 GO:0004185|GO:0006508
Alju04g1904 475 SUPERFAMILY alpha/beta-Hydrolases 34 471 IPR029058 -
Alju04g1904 475 Gene3D - 324 473 - -
Alju04g1904 475 Gene3D alpha/beta hydrolase 28 295 IPR029058 -
Alju04g1904 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 455 IPR001563 GO:0004185|GO:0006508
Alju04g1904 475 FunFam Serine carboxypeptidase-like 19 27 294 - -
Alju04g1904 475 FunFam Carboxypeptidase 323 475 - -
Alju04g1904 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Alju04g1904 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Alju04g1904 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Alju04g1904 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1904 Alju-ChrAlju04 49132172 49138236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1904 336 475 Calmodulin-binding Proteins AT2G22960 44.286 3.07e-33 122