Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1882 ATGAGTCCATTTGAGATGCCAACTGGGTGGAGATTCTGTCCAGAAGACTCCGAACTCATTAAAGACTATCTTTACAATAAAATCATGGCACAAAAATTACCGTTCGAAGGTATAATTGTAGAATACGATCTTTATGGTAAAGAGAATCCTTGGGAAATCTGGGAACATTTTAGTGAACATTTGGTTAAAACAGTTGACGGTGAAGATCTCTACGTCTTCACAAAAGTAAAGAGGAAGAACCCTCAATCTAGAAATGCAGAAAGGAGGGTGGGGTTAGGTTCTTGGGAAGGAGAAGCTCATCATGCAAAAAATATAACAGCCAACGTAAACGATTCAAATCATCAATTTGTGATTGGGTTCATGAAGAGGTTTAGATTTGAGAAAAGTAGAACTGATCAAGATGGAAAATGGATTATGCATGAGTATTCTCTTCATCCATCGCTATTTCCTTCTAATTATTATTACCTACAAATGAAAGATTATGTTCTCTGTAGGATAAGAAAAAATGACAGACCCGTTAAACTACGGGAGAAAAGAAAAGAGCCAGAAAAAAATCAACAAAAATATTATGGAGAGCAAAAAGAAAATCAAAGAAACAAGAAGACAAGACTAGAGTCAAAAGAAAAAGTTCAAAAAAGAATTTGTAAAGAGAGAAAAGATGATGAAAGAAATCCACCGGCCAAGATCCAGGAAGAAGAGAGCAACATGTCCATGGATAATTTTTGTTCTTGGTTAAAGACAAACTTAAGTTCCGATGACGATCAAGGAGAGAAGAACGATAAAGAACTCTCCCGAAAAGAGACCAAGTCATCCAGGAACAATTTTACCCCTCAGGCCAACAATTTTTTGAGTCTAGAGGAAGAGGAAGGAGGGTGCCAAAAGATGCTGATGCTCAGTGCAAGACGTAGACTAGGACGTGTTTGGCAAATATAA 933 0.3708 MSPFEMPTGWRFCPEDSELIKDYLYNKIMAQKLPFEGIIVEYDLYGKENPWEIWEHFSEHLVKTVDGEDLYVFTKVKRKNPQSRNAERRVGLGSWEGEAHHAKNITANVNDSNHQFVIGFMKRFRFEKSRTDQDGKWIMHEYSLHPSLFPSNYYYLQMKDYVLCRIRKNDRPVKLREKRKEPEKNQQKYYGEQKENQRNKKTRLESKEKVQKRICKERKDDERNPPAKIQEEESNMSMDNFCSWLKTNLSSDDDQGEKNDKELSRKETKSSRNNFTPQANNFLSLEEEEGGCQKMLMLSARRRLGRVWQI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1882 310 Gene3D NAC domain 16 174 IPR036093 GO:0003677|GO:0006355
Alju04g1882 310 MobiDBLite consensus disorder prediction 251 269 - -
Alju04g1882 310 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Alju04g1882 310 MobiDBLite consensus disorder prediction 174 233 - -
Alju04g1882 310 Pfam No apical meristem (NAM) protein 7 144 IPR003441 GO:0003677|GO:0006355
Alju04g1882 310 PANTHER NAC TRANSCRIPTION FACTOR 56 6 231 - -
Alju04g1882 310 MobiDBLite consensus disorder prediction 174 229 - -
Alju04g1882 310 ProSiteProfiles NAC domain profile. 6 169 IPR003441 GO:0003677|GO:0006355
Alju04g1882 310 MobiDBLite consensus disorder prediction 248 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1882 Alju-ChrAlju04 48715959 48717301 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1882 6 168 NAC Transcription Factor Family AT3G04070 33.333 3.17e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju04g1882 NAM 9.7e-24 No_clan