Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1877 ATGAGTCCATTTGAGATGCCAACTGGGTGGAGATTCTGTCCAGAAGACTCCGAACTCATCAAAGACTATCTTTACAATAAAATCATGGCACAAAAATTACCGTTCGAAGGTATAATTGTAGAATACGATCTTTATGGTAAAGAGAATCCTTGGGAAATCTGGGAACATTTTAGTGAACATGTGGTTAAAACAGTTGACGGTGAAGATCTCTACGTCTTCACAAAAGTAAAGAGGAAGAACCCTCAATCTAGAAATGCAGAAAGGAAGGTGGGGTTAGGTTCTTGGGAAGGAGAAGCTCATCATGCAAAAAAAATAACAGCCAACGTAAACAATTCAAATCATCAATTTGTGATTGAATTCATGAAGAGGTTTAGATTTGAGAAAAGTAGAACTGATCAAGATGGAAAATGGATTATGCATGAGTATTCTCTTCATCCATCGCTATTTCCTTCTAATTATTATGAAAGATTATGTTCTCTGTAG 483 0.3623 MSPFEMPTGWRFCPEDSELIKDYLYNKIMAQKLPFEGIIVEYDLYGKENPWEIWEHFSEHVVKTVDGEDLYVFTKVKRKNPQSRNAERKVGLGSWEGEAHHAKKITANVNNSNHQFVIEFMKRFRFEKSRTDQDGKWIMHEYSLHPSLFPSNYYERLCSL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1877 160 SUPERFAMILY NAC domain 4 149 IPR036093 GO:0003677|GO:0006355
Alju04g1877 160 Gene3D NAC domain 16 155 IPR036093 GO:0003677|GO:0006355
Alju04g1877 160 Pfam No apical meristem (NAM) protein 7 144 IPR003441 GO:0003677|GO:0006355
Alju04g1877 160 PANTHER NAC TRANSCRIPTION FACTOR 56 6 146 - -
Alju04g1877 160 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1877 Alju-ChrAlju04 48569797 48570405 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1877 6 150 NAC Transcription Factor Family AT3G04070 33.108 1.01e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju04g1877 NAM 6.6e-23 No_clan