Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1829 ATGCTAAAGATGGGAAAACTTGACTCCTTTGTTTTAGTGCTTTCACTTCACTGCTTCATAACCTCTCTAGTTGGGAGTGAGATAGACATCACCTCTGACAAATATGCACTTATTGCTCTTAAATCTGTTATCTCTTCCGATCCGTACAATCTCTTAGCTAATTGGTCTGTATCTTCTTCTCCATGTGACTGGATCGGTGTCACCTGCAATATCCGCCATAGAAAAGTCTATTCCTTGAATCTTGGTAATATGGATCTTAAAGGCATCATATCTCCTCAACTGGGAAATCTCTCATTCCTTGTTGAGCTTGATCTTAGCAACAACCATTTTCATGGTCAAATACCAATAGAATTGGTTCGATTGCGTAGATTGAAACTGATCAATTTGAGCTACAATGATTTTGGTGGACAAGTTCCAGCATGGATAGGAGATTTATCTACACTTGAGCACTTAGATCTTCGCAACAATAGTATTTTTGGATTGATTCCCTTGTCTCTATGCAATTTGTCAAGGTTGGAGATCTTGAATTTGAATTATAATTTAATTGAAGGGACTATTCCATTTGAGTTGGGAAGACTCAAGCACTTGAAAATTTTACGACTTGCGGGAAACAAGCTTACTGGGACGATTCCTCAAACAATTTCTAATTTATCTTCACTTGAATATTTGAGTTTGAGTTCCAATACTTTATCAGCTACATTTGGCTATATGGCACCAGAGTATGGATCAAAAGGGGCGGTTTCTGTGAAAGGAGATGTATATAGTTTTGGTATTTTACTTATGGAACTGCTTACAAGGAAGAAGCCCACGGATGAGATGTTTGGTCAAGGTCTAAATTTAAAAGATTGGGTTCGCGAATCAACACCACACTCAATTATCAATATCTTAGATGACAATTTGCTGCACAGAGACAATCAAAATATTGGTAACATATTACCACATATTTCATCAATGTTTGAATTGGCCTTAAGCTGTTGCACTGATATACCTGAGGCACGACTTGATATGACAGATATTGTGGCATCATTGAAAAAAATAAGGTCATATTTATGCAAAATGTTGGAGGCACCAACCAGAAGGTGA 1083 0.373 MLKMGKLDSFVLVLSLHCFITSLVGSEIDITSDKYALIALKSVISSDPYNLLANWSVSSSPCDWIGVTCNIRHRKVYSLNLGNMDLKGIISPQLGNLSFLVELDLSNNHFHGQIPIELVRLRRLKLINLSYNDFGGQVPAWIGDLSTLEHLDLRNNSIFGLIPLSLCNLSRLEILNLNYNLIEGTIPFELGRLKHLKILRLAGNKLTGTIPQTISNLSSLEYLSLSSNTLSATFGYMAPEYGSKGAVSVKGDVYSFGILLMELLTRKKPTDEMFGQGLNLKDWVRESTPHSIINILDDNLLHRDNQNIGNILPHISSMFELALSCCTDIPEARLDMTDIVASLKKIRSYLCKMLEAPTRR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1829 360 ProSiteProfiles Leucine-rich repeat profile. 147 168 IPR001611 GO:0005515
Alju04g1829 360 Pfam Leucine rich repeat 195 230 IPR001611 GO:0005515
Alju04g1829 360 SUPERFAMILY Protein kinase-like (PK-like) 225 350 IPR011009 -
Alju04g1829 360 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Alju04g1829 360 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 234 347 IPR046959 -
Alju04g1829 360 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Alju04g1829 360 SUPERFAMILY L domain-like 31 233 - -
Alju04g1829 360 Gene3D Transferase(Phosphotransferase) domain 1 208 354 - -
Alju04g1829 360 FunFam Piriformospora indica-insensitive protein 2 141 235 - -
Alju04g1829 360 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Alju04g1829 360 ProSiteProfiles Protein kinase domain profile. 1 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1829 360 Pfam Protein kinase domain 227 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1829 360 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 32 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1829 Alju-ChrAlju04 47026719 47032527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1829 222 347 Receptor kinase-like Gene Family AT3G47110 33.858 1.65e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1829 Pkinase 1.8e-08 CL0016