Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1828 ATGATTGATGTGGCATCAGCATTAGAGTATCTTCATCATGGTTCTTCAACACCAGTGGTCCATTGTGATGTAAAGCCAAGCAATGTTTTATTGGATGAAAATATGGTGGCCCATTTGAGTGACTTTGGAATTGCCAAATTGTTGAGTGACAATCAATCAGAAATTTATACCAAAACTTTGGCTACAATTGGTTATATGGCACCAGAGTATGGATCAAGAGGAGTTGTTTCAATGAAAGGAGATGTATACAGTTTTGGTATTTTGCTTATGGAAATGTTTACAAGGAAGAAACCAACTGATGATATATTTGTTCAAGGTGAAGTTGGGCTGGGCTAA 336 0.369 MIDVASALEYLHHGSSTPVVHCDVKPSNVLLDENMVAHLSDFGIAKLLSDNQSEIYTKTLATIGYMAPEYGSRGVVSMKGDVYSFGILLMEMFTRKKPTDDIFVQGEVGLG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1828 111 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
Alju04g1828 111 Pfam Protein kinase domain 2 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1828 111 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Alju04g1828 111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Alju04g1828 111 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 99 - -
Alju04g1828 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1828 Alju-ChrAlju04 46934645 46935631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1828 2 103 Receptor kinase-like Gene Family AT5G20480 58.333 5.85e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1828 Pkinase 1.6e-25 CL0016