Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1815 ATGAGAAAACCTTCTTCCTTTCTTTTCGTCTTCTTACTTCATTGCCTCACGACCTCTGTAGTTTGGAGTGAGAATGATATCGCCACGGACAAATTTGCACTTCTTACTTTTAAATCCTTCGTCTCTTTGGATCCATACAATTTCTTAGCAAATTGGTCGGTCTCTTCTTCTCCATGCAATTGGATTGGTGTCACCTGCAATGCTCGTCATGGAAGGGTCCGTTCCTTACATCTTAGTGGTATGAATCTCATTGGCATTTTATCTCCACAACTAGGAAATCTGTCATTTCTTGTTGACCTTGATCTTAGTAGCAACAATTTTCATGGTCAAATACCGAAAGAACTGGTTCGACTACATAGATTAAAGCTGCTTAACTTGAGCTACAACGACTTTCGTGGACAAGTTCCAACATGGATAGGAACTTTATCTACACTTCAACACCTGGATCTTTGCAATAACAGTTTTAATGGATTTATTCCACCATCTTTGTCCAATTTATCGAGGTTGGAGACTTTGGATTGGAATTATAATTTCATTGAAGGGACCATTCCACATGAGATAGGAAATCTAAAGCACTTGAAGATCCTACGACTTTCATATAACAAGCTTTATGGAGAAATTCCCCAAACAATTTCCAATTTATCTTCACTTGAAAGATTGAGTTTGTCTTATAACACTCTATCAGGTGAAATTCCATTGTCTCTTTTCAATATTTCTTCATTGAGAGAAATAAATCTACGTCAAAACAATCTACAAGGAAATATCCCAATATCATTTGGCAATTGGGCGTTACTCGAAAGTTTAGATCTAAGTTACAACTCCTTTACAGGTGAAATTCCATCATCTCTCTTCAACATTTCTTCTTTAATAGTAGTGTCTTTAACAAGCAACAAATTAAAAGGTAGACTACCATCATCAATCGGTAATTGCACGTTCCTGGAATATTTATATCTAGAAGAAAATTCATTAACAGGGGAAATTCCATCATCTCTCTCCAGTATTTCTTCTTTAAGAGAAATATTTTTAACAAGAAACAGATTTAATGGTAGTCTACCTATGTCAATTGGCAATCAGACAATGCTGGAATATTTATATATAGGTGACAACTCCTTTACAGGTGAAATTCCAGAAGAGATGTGCCATCAACTCCCTCTACTTGAAGTTTTTCAGGCTGTTAATAATCAATTAGAGGGAAACATTCCAAAATCAATAAGTAACTGTACATCTTTGCTAGCCTTATATTTGGGTATGAATTCATTCTCAGGTTTTATACCCAAAGAGATAGGGAATCTTGATAAGCTTGAAGAGTTGGATTTCTCAGAGAATAATTTTAACGGACCCTTTCCTTCACATATATTCAACATTTCGGCATTGACCTGGGTCTCCCTCGCACATAATTCATTCTCTAGCTTTCTCCCATCAAATTTGGGAATTGGCCTTCCCAACCTGAAGGAATTGAAGTTGGGACAGAATCAACTTATTGGACAAATTCCAAACAGCATTTCAAATGCTTCTGAGCTCACTGTGTTAGATTTATCAGGGAATAAATTTAGTGGTAGTATAACCAATGTACTTGGGAATCTAACAAACTTGATGGCATTATATTTTGACGGGAATGCTTTGAATGGGTTGATTCCAAATACAATCAACAGACTGCAAAGCCTTCAACATTTGAGTCTTAGCAACAACAGATTGCAAGGGCCCATCATAAATGAATTGTGCCAAATAAAAAGTTTGAGTGAGTTGTATCTAGCCAACAACATGTTTTCAGGAGTGATTCCAAGCTGCCTCACAAATACTTTTCTGCGGAAGTTGGATTTAAGCTCTAACAAATTGATTTCTCATATACCCTCCTCTCTTTGGAGTCTACAAGATATATTAGTGTTAGACTTATCCTCCAATGCATTGAGTGGAAGAATTCCTCCAGAGGTATCAAACTTGAAAGCAATTATACTCTTGAACTTGTCAAGAAATCAAATTGTAGGAAACATCCCTACAACCTTGGGTGGCTTGCAAACTTTGTTAAACCTATCTTTGGCTCATAACAAATTACAAGGGCCTATACCTGAATCACTTGGTGGCATGGTAAGCTTGGTGTCCTTGGATCTCTCTAAAAATTACTTGTCTGGTGTGATTCCGAAATCATTGGAGTCACTTGTCCATCTGAAATACATAAACCTTTCATACAATTTATTGCAAGGAGAAATTCCAAATGGTGGTTCTTTTGAAAATTTTTCAGCTGATTCTTTTATGATGAATGAAGGTCTTTGTGGGATGCCTCAACTACTTGTTCAGCCATGTAGGAAAGGAAACAAGCATAACTCAAGTAAAGTTATGTTGTTGATAATATGCTTGTTGCCTAGCTTGGTTGCCTTTTTGGTTACTGTTCTATGCGTAGTCCTTCTAAAGCATAAGAAAGGTCATCCTAATGATTCGACTAATGAGGATTTAATTAATTTTGGGTCACCAATGAGGATATCTTATTATGAGCTTCTTCGTGGAACAAATGAATTTGATGAGAGTAATCTTCTTGGAAGGGGAAGTTTTGGATCAGTCTACAAAGCAATTCTTCCAAATGGAATAATTGTTGCTGTTAAAGTATTTAATTCAAGCGTAGAAGGAGCTTTGAATAGTTTTGAAACTGAATGTGCCGCTTTGTACAATGTACGTCATCGCAATCTCACTAAGATGATTAGTGATTGCTCACATGGTGAATTTAAATCCATAATAATGGAATTCATGTCAAATGGGAGTCTTGACATATGGTTGCACTCTAATAACTATTATTTAGATATCTTGCAAAGGTTGAATATAATGATTGATGTGGCCGCTGCTTTGGAGTATCTTCATCATGGTTCTCCTGTACCAATTGTTCATTGTGACATAAAACCAAGCAACATATTGTTGGATGAAGATATGGTGGCTCACCTTAGTGATTTTGGTATTGCCAAATTGTTGGGTGAAAGACGGATGGAAATTTATACCAAGACTTTGGCTACAATAGGCTATATGGCACCAGAGTATGGATCAGAAGGAATTGTTTCATTTAAAGGAGACGTATATAGTTATGGCATTTTGTTGATGGAAATTCTTACAAGAAAGAAACCAACAGATGAGATGTTTGTTCAAGGTCTGAGTTTGAAAGATTGGATTAGCAAATCAACACCTCATTCCATCATTAATATTCTAGATGCCAATTTGTTGCCAAGAGATGATCAAAATATTGACATCATATTGTCACATATATCACCACTTCTTGAGTTGGCCTTAGATTGCTGCATTGATTTACCTGGAGCGCGAATTAATATGAAGGATGTGGTTGTAAAACTTAACAAAATCAAGACATCTTTTATCAAAAATGTTAGCGACACCACTAACTATTTGAATAATTGTTAA 3396 0.3604 MRKPSSFLFVFLLHCLTTSVVWSENDIATDKFALLTFKSFVSLDPYNFLANWSVSSSPCNWIGVTCNARHGRVRSLHLSGMNLIGILSPQLGNLSFLVDLDLSSNNFHGQIPKELVRLHRLKLLNLSYNDFRGQVPTWIGTLSTLQHLDLCNNSFNGFIPPSLSNLSRLETLDWNYNFIEGTIPHEIGNLKHLKILRLSYNKLYGEIPQTISNLSSLERLSLSYNTLSGEIPLSLFNISSLREINLRQNNLQGNIPISFGNWALLESLDLSYNSFTGEIPSSLFNISSLIVVSLTSNKLKGRLPSSIGNCTFLEYLYLEENSLTGEIPSSLSSISSLREIFLTRNRFNGSLPMSIGNQTMLEYLYIGDNSFTGEIPEEMCHQLPLLEVFQAVNNQLEGNIPKSISNCTSLLALYLGMNSFSGFIPKEIGNLDKLEELDFSENNFNGPFPSHIFNISALTWVSLAHNSFSSFLPSNLGIGLPNLKELKLGQNQLIGQIPNSISNASELTVLDLSGNKFSGSITNVLGNLTNLMALYFDGNALNGLIPNTINRLQSLQHLSLSNNRLQGPIINELCQIKSLSELYLANNMFSGVIPSCLTNTFLRKLDLSSNKLISHIPSSLWSLQDILVLDLSSNALSGRIPPEVSNLKAIILLNLSRNQIVGNIPTTLGGLQTLLNLSLAHNKLQGPIPESLGGMVSLVSLDLSKNYLSGVIPKSLESLVHLKYINLSYNLLQGEIPNGGSFENFSADSFMMNEGLCGMPQLLVQPCRKGNKHNSSKVMLLIICLLPSLVAFLVTVLCVVLLKHKKGHPNDSTNEDLINFGSPMRISYYELLRGTNEFDESNLLGRGSFGSVYKAILPNGIIVAVKVFNSSVEGALNSFETECAALYNVRHRNLTKMISDCSHGEFKSIIMEFMSNGSLDIWLHSNNYYLDILQRLNIMIDVAAALEYLHHGSPVPIVHCDIKPSNILLDEDMVAHLSDFGIAKLLGERRMEIYTKTLATIGYMAPEYGSEGIVSFKGDVYSYGILLMEILTRKKPTDEMFVQGLSLKDWISKSTPHSIINILDANLLPRDDQNIDIILSHISPLLELALDCCIDLPGARINMKDVVVKLNKIKTSFIKNVSDTTNYLNNC 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1815 1131 SUPERFAMILY L domain-like 47 376 - -
Alju04g1815 1131 SUPERFAMILY L domain-like 503 761 - -
Alju04g1815 1131 Pfam Leucine Rich Repeat 265 283 IPR001611 GO:0005515
Alju04g1815 1131 Pfam Leucine Rich Repeat 145 166 IPR001611 GO:0005515
Alju04g1815 1131 SMART serkin_6 838 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1815 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Alju04g1815 1131 SMART LRR_typ_2 552 573 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 190 213 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 142 166 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 576 599 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 480 504 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 719 744 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 94 118 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 455 479 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 528 551 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 600 623 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 214 238 IPR003591 -
Alju04g1815 1131 SMART LRR_typ_2 695 718 IPR003591 -
Alju04g1815 1131 Pfam Protein kinase domain 839 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1815 1131 Gene3D Ribonuclease Inhibitor 476 769 IPR032675 -
Alju04g1815 1131 ProSitePatterns Protein kinases ATP-binding region signature. 844 866 IPR017441 GO:0005524
Alju04g1815 1131 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 914 1123 - -
Alju04g1815 1131 FunFam MDIS1-interacting receptor like kinase 2 isoform A 185 281 - -
Alju04g1815 1131 ProSiteProfiles Protein kinase domain profile. 838 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1815 1131 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Alju04g1815 1131 Gene3D Ribonuclease Inhibitor 381 475 IPR032675 -
Alju04g1815 1131 Gene3D Ribonuclease Inhibitor 182 278 IPR032675 -
Alju04g1815 1131 FunFam Leucine-rich repeat receptor protein kinase EMS1 379 475 - -
Alju04g1815 1131 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Alju04g1815 1131 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 514 1111 - -
Alju04g1815 1131 SUPERFAMILY Protein kinase-like (PK-like) 814 1110 IPR011009 -
Alju04g1815 1131 FunFam Leucine-rich repeat receptor protein kinase EMS1 282 378 - -
Alju04g1815 1131 Pfam Leucine rich repeat 674 732 IPR001611 GO:0005515
Alju04g1815 1131 Pfam Leucine rich repeat 530 588 IPR001611 GO:0005515
Alju04g1815 1131 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Alju04g1815 1131 Pfam Leucine rich repeat 457 517 IPR001611 GO:0005515
Alju04g1815 1131 Gene3D Ribonuclease Inhibitor 279 380 IPR032675 -
Alju04g1815 1131 SMART LRR_sd22_2 142 168 - -
Alju04g1815 1131 SMART LRR_sd22_2 599 615 - -
Alju04g1815 1131 SMART LRR_sd22_2 431 457 - -
Alju04g1815 1131 SMART LRR_sd22_2 695 721 - -
Alju04g1815 1131 SMART LRR_sd22_2 480 506 - -
Alju04g1815 1131 SMART LRR_sd22_2 190 216 - -
Alju04g1815 1131 SMART LRR_sd22_2 552 575 - -
Alju04g1815 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 184 - -
Alju04g1815 1131 Gene3D Phosphorylase Kinase; domain 1 802 913 - -
Alju04g1815 1131 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 477 771 - -
Alju04g1815 1131 SUPERFAMILY L domain-like 336 474 - -
Alju04g1815 1131 Gene3D Transferase(Phosphotransferase) domain 1 914 1129 - -
Alju04g1815 1131 Pfam Leucine Rich repeat 598 612 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1815 Alju-ChrAlju04 46549946 46555562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1815 33 1114 Receptor kinase-like Gene Family AT5G46330 35.569 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1815 Pkinase 6.9e-42 CL0016