Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1813 ATGGGAAAAGCTCCTACCTTTGTTTTCCTTTTCTTACTTCATTTCTTCATAGTCTCTTTAGCTTGGAGTGAAACAAACATTACCACTGACAAATATGCACTTCTTGCTCTAAAATCCCTTATCAGTTATGATCCATACAACTTTTTAGCTAATTGGTCTGTCTCTTCTTCTCCATGTAATTGGGTTGGTGTCAGTTGCAGTACTCGCCATGGAAGGGTCCGTTCCTTGAATCTTGATAAGACTAGTCTTAAGGGCATCATAATTCCACAATTGGGAAATCTTTCATTCCTTGTTGACCTTGATCTTCGTAACAACAATTTTCATGGTCAAATACCGGAGCAGTTAGTTCAATTACGTAGATTGAAACTACTCAGGTTAAGTTTTAATAAATTGGATGGGAAAATTCCAACTTGGATTGGGCATTTATCAAGATTGCAACAGTTGAGTCTTGACCATAATCGTCTTAGCGGGTTCATTCCAATATCTGTTTGCAACTTGTCAAGATTACATGTCTTGGATTGGAGTGCTAATTTAATTGAAGGGACCATTCCACTTGAGGTAGGAAGAATCAAGAACCTGAAGAATTTATCATTTGCTGATAACAAACTTTCAGGAACCATTCCCCAATCAATTTCCAACTTATCTTCGCTTGAATCATTGGATTTGTTTTATAACTCTCTTTCAGGTGAAATTCCATCGCCTCTTTTCAGCAATATGTCTTCTTTAATGGAATTATCTTTGGAGGGAAATAATTTAAATGGTACTCTCCCAACATCAATTGGCAATAAAACATTGCTCAATTACTTAAGCCTGCAATTCAATTCCTTTACAGGTGAAATTCCTCGGTCTCTTTTCAACATGCCTTCTATGACAGAGTTTACCCTTGGCATCAACCAATTATCTGACATCTTGCAAAGGTTGAATATAATGATCGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCTTTGCCAGTGGTTCATTGTGATGTAAAGCCAAGCAATGTTTTGTTAGATGAAGATATGGTAGCCCATCTTAGTGATTTTGGAATTGCCAAATTGTTAGGCCTTGGACAATCAGAAATTTATACCAAAACTTTAGCTACATTTGGTTATATGGCACCAGAGTATGGAACAGAAGGGGCGATTTCTGTGAAAGGAGATGTATATAGTTTTGGTATTTTACTTATGGAACTGCTTACAAGGAAGAAGCCCACGGATGAGATGTTTGGTCAAGGTCTAAATTTAAAAGATTGGGTTCGCGAATCAACACCACACTCAATTATCAATATTTTAGATGACAATCTGCTGCGCAGAGACAATCAAAATATTGGTAACATATTACCACATATTTCATCAATGTTTGAATTGGCCTTAAGCTGTTGCACTGATATACCTGAGGCACGGCTTGATATGACAGATATTGTGGCATCATTGAAAAACGTAAGGTCATATTTATGCAAAATGTTGGAGGCACCAACCAGAAGGTGA 1497 0.3721 MGKAPTFVFLFLLHFFIVSLAWSETNITTDKYALLALKSLISYDPYNFLANWSVSSSPCNWVGVSCSTRHGRVRSLNLDKTSLKGIIIPQLGNLSFLVDLDLRNNNFHGQIPEQLVQLRRLKLLRLSFNKLDGKIPTWIGHLSRLQQLSLDHNRLSGFIPISVCNLSRLHVLDWSANLIEGTIPLEVGRIKNLKNLSFADNKLSGTIPQSISNLSSLESLDLFYNSLSGEIPSPLFSNMSSLMELSLEGNNLNGTLPTSIGNKTLLNYLSLQFNSFTGEIPRSLFNMPSMTEFTLGINQLSDILQRLNIMIDVASALEYLHHGSSLPVVHCDVKPSNVLLDEDMVAHLSDFGIAKLLGLGQSEIYTKTLATFGYMAPEYGTEGAISVKGDVYSFGILLMELLTRKKPTDEMFGQGLNLKDWVRESTPHSIINILDDNLLRRDNQNIGNILPHISSMFELALSCCTDIPEARLDMTDIVASLKNVRSYLCKMLEAPTRR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1813 498 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Alju04g1813 498 SUPERFAMILY L domain-like 28 307 - -
Alju04g1813 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Alju04g1813 498 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 301 - -
Alju04g1813 498 Pfam Protein kinase domain 308 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1813 498 SMART LRR_sd22_2 166 187 - -
Alju04g1813 498 SMART LRR_sd22_2 142 163 - -
Alju04g1813 498 SMART LRR_sd22_2 190 216 - -
Alju04g1813 498 Gene3D Ribonuclease Inhibitor 69 301 IPR032675 -
Alju04g1813 498 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 187 - -
Alju04g1813 498 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 208 304 - -
Alju04g1813 498 ProSiteProfiles Protein kinase domain profile. 193 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1813 498 SUPERFAMILY Protein kinase-like (PK-like) 301 481 IPR011009 -
Alju04g1813 498 SMART LRR_typ_2 94 118 IPR003591 -
Alju04g1813 498 SMART LRR_typ_2 142 166 IPR003591 -
Alju04g1813 498 SMART LRR_typ_2 239 263 IPR003591 -
Alju04g1813 498 SMART LRR_typ_2 214 238 IPR003591 -
Alju04g1813 498 Gene3D Transferase(Phosphotransferase) domain 1 302 491 - -
Alju04g1813 498 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Alju04g1813 498 SMART serkin_6 150 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1813 498 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 289 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1813 Alju-ChrAlju04 46471704 46479303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1813 305 486 Receptor kinase-like Gene Family AT5G20480 40.625 6.25e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1813 Pkinase 6.6e-27 CL0016