Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1797 ATGCTGAGGAATAAGCGAGCAAAGAGAGGACTGAGGAGAACTTGGCCTGAGACTTGGATTTACGGTGGAAGGAGAGAAAAGGTGGAAGATGATTCAACTGATAGGCCTATTCCTGAATCGCTTAGTGGCATGACAAGCATGGAGTCTCTTGATCTTTCCCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAAATACATCAATTTTTCCTACAATTTATTGCATGGAGAAATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTCAGTCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACATATCAAATAAAGTGATGCTGATAGTAAAATGCTCATTGCCTATCATAGTCGCCATTTTGATTGTTTCAGGCATTGTCTTTCTAAAGAATAAGAGAGATGTTGATAACGAATCAACAAAGAGGGATTTAATAAATTTGGATACTCCAACCAGAATATCCTATTATGAGCTTTTACGGGGTACAAATGGATTTGATGAGAGTAATCTTGTTGGTACTGGAAGTTTTGGGTCAGTATACAAAGCAGTTCTTTCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACTTAGATATGGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATTTACGCCATCGTAATCTCATTAAGATCATTAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGAGAGATGTTTGTACTCTCATAACTATTGTTTGAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCGGCTGCTTTGGAGTATCTTCATCATGGTTCTTCTACCCTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGACCAAGATATGGTGGCTCATCTTAGTGATTTTGGAATTGCTAAATTGTTTGGTGAAAAGCAATTGGAAATTTATACTAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCTGCCAAAGGAGATGTGTATAGTTATGGCATTTTGCTAATGGAAATGTTTACAAGGAAGAAACCAACGGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTGAGCACCTCCACACCTCATTCCATCATGAATATTATAGATGCCAATTTGCTACACAGTGAAAATCAAAATACTGATCATATACTACATTATATGTCATCAGTTTTTGAGTTAGCATTAAATTGCTCCATTGACTTACCAGAGGCACGACTTACTATGATTGATGTTGTAGTATCATTGAAAAAAATCAAGGCTTTGTTTATGGAAAATGCCTGA 1410 0.3624 MLRNKRAKRGLRRTWPETWIYGGRREKVEDDSTDRPIPESLSGMTSMESLDLSHNYLSGVIPKSLESLLYLKYINFSYNLLHGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCRKGNKHISNKVMLIVKCSLPIIVAILIVSGIVFLKNKRDVDNESTKRDLINLDTPTRISYYELLRGTNGFDESNLVGTGSFGSVYKAVLSNEKIVAVKVFNLDMEEASRSFDVECSAMCHLRHRNLIKIISSCSNDHFKSLIMEFMENGSLERCLYSHNYCLNVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDQDMVAHLSDFGIAKLFGEKQLEIYTKTLATIGYMAPEFGSKGVVSAKGDVYSYGILLMEMFTRKKPTDEMFVQGLSLKDWVSTSTPHSIMNIIDANLLHSENQNTDHILHYMSSVFELALNCSIDLPEARLTMIDVVVSLKKIKALFMENA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1797 469 FunFam Serine-threonine protein kinase plant-type 166 261 - -
Alju04g1797 469 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 262 469 - -
Alju04g1797 469 SMART serkin_6 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1797 469 PANTHER OS04G0122200 PROTEIN 32 463 - -
Alju04g1797 469 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Alju04g1797 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Alju04g1797 469 SUPERFAMILY Protein kinase-like (PK-like) 165 458 IPR011009 -
Alju04g1797 469 Pfam Protein kinase domain 188 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1797 469 Gene3D Ribonuclease Inhibitor 29 124 IPR032675 -
Alju04g1797 469 Gene3D Phosphorylase Kinase; domain 1 147 261 - -
Alju04g1797 469 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1797 469 Gene3D Transferase(Phosphotransferase) domain 1 262 468 - -
Alju04g1797 469 SUPERFAMILY L domain-like 36 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1797 Alju-ChrAlju04 45854349 45858892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1797 37 467 Receptor kinase-like Gene Family AT3G47570 39.783 3.14e-96 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1797 Pkinase 1.2e-46 CL0016