Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1792 ATGCTCCTCATGGCAAAACCTTCTTTCTTTGTTTTCCTGCTCTTACTTTACTGCTTTATGCTTTCCTTGGCTTGGACTGATACAAACGTCAGTACTGATAAATCTGCACTTCTTGCCCTTAAATCTTATATCACTTCAGATCCATACAATTACTTAGCTAATTGGTCTGCCTCTTCTTCTCCATGCAATTGGACTGGTGTCACATGCAATACTCGTCATGGAAGGGTCCACTCCTTGAATCTTGGCAGTATGGGTCTCAAGGGCACCATATCTCCACAACTGGGAAATCTCTCATTCCTTGTTGAACTTGATCTCAGTGACAATAACTTTTACGGTCAAATACCAGAAGAGTTAGTTCGATTGCGAAGATTGAAACTATTCAACTTGAGCTATAATGACTTTCATGGGCAAGTCCCAACTGAGATAGGAGATTTATCTATGCTTGTGCACATGAGTTTTCAAAATAACAGTCTTAATGGATTTATTCGACTATCTCTATTCAATCTATCAAGGTTGGAGACTTTAGATTTGAAATTTAATTTTATTGAAGGAACCATTCCGTTAGAGGTGGGTAGACTTGAGCGATTGAAGAATTTACGACTTGGCAGTAACAAACTTTCAGGATTCATTCCCCAGACCATTTCTAACTTATCTTCGCTTGAGTTATTGGGTTTGTCTTATAATAGTTTGTCAGGTGGCATCCCAAATGAGATTGGCAATCTTTCACAACTAAAGATGTTGCATCTTGGAGTGAATCAGCTTTCTGGTTCTATACCATCTTCATTATTTAACATTTCAATGCTGCAACAGATTGATTTTAGTCACAATCAATTATCTGGTAGTCTCCCAAAAAATGTGTGTTTTGGGCTTCCAAAACTTGAACTATTTTTTGTGAATGCAAATGATTTGTCTGGCGAAATTCCCTCAATTTGGCATCCATGCAAAGAAATAAAAAAGTTACAATTGGGCGATAACAAATTCAACAGAGGAAACATACCCAATGATATTGGAAATTTGACCAAACTGCAGCTGCTACATCTTTCAAGCATCAACTTGCAAGGCGGAATTCCTTCTTTTCTTTGGAACATGCCTTCTTTGATAAAGGTTTTTTTGGGCGAAAATAATTTAAACGGTAATTTGCCAGAAGAAATGTGCCATCAATTCCCTTTACTTGAACTGTTTGACGTTGATGATAATCAATTAGAGGGAAGCATTCCAAAATCAATAAGCAACTGCACATCTTTGAAAGAATTATATTTGGATGCTAACTCGTTTACAGGTTCTGTACCCGAAGACATAGGCAAACTTGATGAACTTAATGTCTTAGACTTGACAGATAATCATTTGAAAGGACCCATTCCTTCCAACATATTTAACATTTCAACATTGACAATCTTGAGCCTTAGTGGTAATCCCCTCTCTGGCGTTCTCCCATCATATTTAGGAATTGGCCTTCCCAACTTGGAGATATTACAGCTGCAGGAAGTTGGACTAGCTGGACAAATTCCAATCAGCATATCAAATGCTTCCAAACTCATTACGTTAAGGTTGTCACAAAATAAATTTAATGGAGCTACACCTAATGTCCTTGGAAATTTGACAAACTTGATCCAACTAGATTTGGAAGAGAACCATTTGAGTGGGTTGATTCCTGATACAGTTCACAAATTACATAGCCTTCAACGTTTAAGGCTTAGCGACAATAGATTGCAAGGGCTCATTATAAATGAACTTTGCCAACTTAAAAGTCTAAGTGAATTGTATCTTGCTAACAACATGTTTTCAGGGGTGGTTCCAGAATGTCTCGGGAATACTTCTTTGCGAGAGTTGAATTTTAGCTCTAACAAATTGGTTTCTCAAATACCCTCTTCTATTTGGAGTCTCAAAGATATCTTGGTTTTAGACATATCCTCCAATGCACTGAATGGAGTAATTTCAACGGAGGTATCAAACTTGGGGGCAATTATACTATTGAACTTATCAAGAAATCAAATTTCAGGAAGCATCCCAACAAATATGGGTGGCCTGCAAACTTTGAAAACCCTATCTTTGGCTGAAAACAAATTAGAAGGGCCTATTCCTGAATCACTTGGCAGTATGGTAAGCATGCAGTCCTTGAATCTTTCCCATAATTATTTGTCTGGCGTGATTCCTAAGTCCTTTGAGTCTTTACTCCATCTTAAATACATCAATCTTTCCTACAATTTATTGCATGGAGAAATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATTCCAACTACAAGTCCAACCGTGCAGGAAAGGGAACAAGCACATATCAAATAAAGTGATGCTAATAATAAAATGCTCATTGCCTACTATTGTTGCCATTTTGATTGTTTCATCCATCGTGGTTCTAAGGAATAAGAGAGACGATGATAATAATTCAACAAAGAGGGATTTAGTAACACCAACCAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGGATTTGATGAGAGTAATCTTGTTGGTTCTGGAAGTTTTGGATCAATATACAAAGCAGTTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACTTAAACATGGAACAATCATCAAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATTTACGTCATCGAAATCTCATTAAGATCATCAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTGTACTCTCATAACAATTATTTAGATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCACCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGACGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCTAAATTGTTTGGTGAAAAGCAATTGGAAATTTACACCAACACTTTGGCTACAATTGGCTATATGGCACCTGAGCTTGGGTCAAAAGGACTTGTTTCCGCCAAAGGAGATGTGTATAGTTATGGGATTTTGCTGATGGAGGTGTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAACTTTGAAAGATTGGGTGAGCAACTCCACACCACATTCCATCATGAATATTATAGATGCCAATTTGCTACACAGAGAAAATCAAAACACTGATAATATACTACCTTGTATGTCATCAGTTTTTGAGTTAGCATTAAATTGCTCCATTGACTTACCAGAGGCACGACTTACTATGATTGATGTTGTAGTATCATTGAAAAAAATCAAGGCTTTGTTTATGGAAAATGCTTGA 3369 0.3687 MLLMAKPSFFVFLLLLYCFMLSLAWTDTNVSTDKSALLALKSYITSDPYNYLANWSASSSPCNWTGVTCNTRHGRVHSLNLGSMGLKGTISPQLGNLSFLVELDLSDNNFYGQIPEELVRLRRLKLFNLSYNDFHGQVPTEIGDLSMLVHMSFQNNSLNGFIRLSLFNLSRLETLDLKFNFIEGTIPLEVGRLERLKNLRLGSNKLSGFIPQTISNLSSLELLGLSYNSLSGGIPNEIGNLSQLKMLHLGVNQLSGSIPSSLFNISMLQQIDFSHNQLSGSLPKNVCFGLPKLELFFVNANDLSGEIPSIWHPCKEIKKLQLGDNKFNRGNIPNDIGNLTKLQLLHLSSINLQGGIPSFLWNMPSLIKVFLGENNLNGNLPEEMCHQFPLLELFDVDDNQLEGSIPKSISNCTSLKELYLDANSFTGSVPEDIGKLDELNVLDLTDNHLKGPIPSNIFNISTLTILSLSGNPLSGVLPSYLGIGLPNLEILQLQEVGLAGQIPISISNASKLITLRLSQNKFNGATPNVLGNLTNLIQLDLEENHLSGLIPDTVHKLHSLQRLRLSDNRLQGLIINELCQLKSLSELYLANNMFSGVVPECLGNTSLRELNFSSNKLVSQIPSSIWSLKDILVLDISSNALNGVISTEVSNLGAIILLNLSRNQISGSIPTNMGGLQTLKTLSLAENKLEGPIPESLGSMVSMQSLNLSHNYLSGVIPKSFESLLHLKYINLSYNLLHGEIPNGGPFQNFTAQSFMMNKDLCGKFQLQVQPCRKGNKHISNKVMLIIKCSLPTIVAILIVSSIVVLRNKRDDDNNSTKRDLVTPTRISYYELLRGTNGFDESNLVGSGSFGSIYKAVLPNEKIVAVKVFNLNMEQSSRSFDVECSAMCHLRHRNLIKIISSCSNDHFKSLIMEFMENGSLDKWLYSHNNYLDVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGISKLFGEKQLEIYTNTLATIGYMAPELGSKGLVSAKGDVYSYGILLMEVFTRKKPTDEMFVQGLTLKDWVSNSTPHSIMNIIDANLLHRENQNTDNILPCMSSVFELALNCSIDLPEARLTMIDVVVSLKKIKALFMENA 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1792 1122 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 915 1122 - -
Alju04g1792 1122 Gene3D Ribonuclease Inhibitor 289 479 IPR032675 -
Alju04g1792 1122 Pfam Protein kinase domain 841 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1792 1122 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Alju04g1792 1122 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 187 - -
Alju04g1792 1122 Gene3D Phosphorylase Kinase; domain 1 800 914 - -
Alju04g1792 1122 ProSiteProfiles Protein kinase domain profile. 839 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1792 1122 FunFam Predicted protein 188 284 - -
Alju04g1792 1122 ProSitePatterns Protein kinases ATP-binding region signature. 845 867 IPR017441 GO:0005524
Alju04g1792 1122 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Alju04g1792 1122 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Alju04g1792 1122 Pfam Leucine rich repeat 658 713 IPR001611 GO:0005515
Alju04g1792 1122 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 527 1112 - -
Alju04g1792 1122 SUPERFAMILY RNI-like 78 426 - -
Alju04g1792 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Alju04g1792 1122 Gene3D Transferase(Phosphotransferase) domain 1 915 1120 - -
Alju04g1792 1122 Gene3D Ribonuclease Inhibitor 186 288 IPR032675 -
Alju04g1792 1122 SMART serkin_6 839 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1792 1122 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 484 776 - -
Alju04g1792 1122 FunFam Serine-threonine protein kinase plant-type 819 914 - -
Alju04g1792 1122 SMART LRR_sd22_2 436 462 - -
Alju04g1792 1122 SMART LRR_sd22_2 193 219 - -
Alju04g1792 1122 SMART LRR_sd22_2 241 267 - -
Alju04g1792 1122 SMART LRR_sd22_2 581 612 - -
Alju04g1792 1122 SMART LRR_sd22_2 169 190 - -
Alju04g1792 1122 SUPERFAMILY RNI-like 346 740 - -
Alju04g1792 1122 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Alju04g1792 1122 SMART LRR_typ_2 436 460 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 557 580 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 217 240 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 700 723 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 581 604 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 652 676 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 97 121 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 363 387 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 193 216 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 605 628 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 241 265 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 724 748 IPR003591 -
Alju04g1792 1122 SMART LRR_typ_2 533 556 IPR003591 -
Alju04g1792 1122 SUPERFAMILY Protein kinase-like (PK-like) 818 1111 IPR011009 -
Alju04g1792 1122 Gene3D Ribonuclease Inhibitor 480 774 IPR032675 -
Alju04g1792 1122 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 285 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1792 Alju-ChrAlju04 45298499 45305447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1792 1 1116 Receptor kinase-like Gene Family AT5G46330 33.447 8.45e-179 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1792 Pkinase 1.4e-44 CL0016