Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1788 ATGCAATTACTAGGAGGTAAGCCATTTGAAGGTTTTGTACCCAAAGGGATAGGCAATCTTGATAAACTTAATGTCTTAAGCTTGGCCGTCAATCATTTGAGAGGACCTATTCCATCCAACATATTCAACATTTCAACATTGACATTGTTAAGCCTTGGTGGTAATTCCTTCTTTGGCGTTCTCCCATCTTATCTAGGAATTAGCCTTCCCAACTTAGAGATATTTTGGGTTGGGGAAAGTGGACTAACTGGGCAGATTCCAAATAGCATATCAAATGCTTCTAAGCTCATTAGTTTAGATTTGTCATCGAATAAATTTAATGGAGTTACACCCAATGAGCTTGGAAATTTAACAAACTTGATGGAATTAGATTTGGATGAGAATCATTTGAGTGGGTTGATTCCTAATACAGCTAACAAATTACATAGCCTTCAACATTTAAGTCTTAGCAACAATAGATTGCAAGGGTTCATTATAAATGAACTTTGCCAACTTAAAAGTCTAAGCGAGTTGTATCTTGCTAACAACATGTTTTCAGGAGTGATTCCAAAATGTCTCGGGAATACTTCTTTGCGAGAGTTGAATTTTAGCTCAAACAAATTGGTTTCTCATATACCCTCTTCTATATGGAGTCTCAAAGATATCTTGGTTTTAGACATATCCTCCAATGCTCTAAGTGGAATAATTTCACCAGAGGTATCAAACTTGAGAGCAATTATGCTATTAAACTTGTCAAGAAATCAAATTTCAGGAAGCATACCTACAACTATAGGTGGCTTGCAAACTTTACAAACCCTATCTTTGGCTGAAAACAAATTACAAGGGCCTATTCCTGAATCGCTTAGTGGCATGATAAGCATGGAATCCCTGGATCTTTCCCATAATTATTTGTCTGGCGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATATATTGCATGGAGAAATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCGACTACAAGTCCAACCATGTAGGAAAGGAAACAGGCACATATCAAATAAAGTGATGCTGATAATAAAATGCTCATTGCCTATCGTAGTTGCCATTTTGATTGTTTTAGTCATTGTCTTTCTGAAGAATAAGAGAAATGATGATAATAATTCAACAAAGAGGGATTTAATGAATTTGGATACACCAACCAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGGATTCGATGAGAGTAATCTTGTTGGTTCTGGAAGTTTTGGATCAGTATACAAAGCAGTTCTTCCAATTGAAAAGATAGTTGCTGTCAAAGTGTTTAACTTAGACATGGAACAATCATCAAGAAGTTTTGATGCTGAATGTAAAACCATGTGCCATTTACGCCATCGTAATCTCATTAAGATCATCAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTGTACTCTCATAACAATTATTTGGATGTCTTGCAAAGGTTGAATATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCATCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTATTGGACAAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCTAAATTGTTTGGTGAAAAGCAATTGGAAATTTATACCAACACTTTGGCTACAATTGGTTATATGGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCAGCCAAAGGAGATGTGTATAGTTATGGGATTTTGCTAATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTCAGTTTGAAAGATTGGGTAAGCAACTCCACACCACATTCGATCATGAACATTATAGATGCCAATTTGCTACACAGTGAAAATCAAAATACTGAAAATATACTGCCTTATATGTCATCAGTTTTTGAGTTAGCATTAAATTGCTCCATTGACTTACCAGAGGCACGACTTACTATGATTGATGTTGTAGTATCATTGAAAAAAATCAAGGCTTTGTTTATCGAAAATGCTTGA 2130 0.3545 MQLLGGKPFEGFVPKGIGNLDKLNVLSLAVNHLRGPIPSNIFNISTLTLLSLGGNSFFGVLPSYLGISLPNLEIFWVGESGLTGQIPNSISNASKLISLDLSSNKFNGVTPNELGNLTNLMELDLDENHLSGLIPNTANKLHSLQHLSLSNNRLQGFIINELCQLKSLSELYLANNMFSGVIPKCLGNTSLRELNFSSNKLVSHIPSSIWSLKDILVLDISSNALSGIISPEVSNLRAIMLLNLSRNQISGSIPTTIGGLQTLQTLSLAENKLQGPIPESLSGMISMESLDLSHNYLSGVIPKSLESLLYLKYINLSYNILHGEIPNGGPFQNFTAQSFMMNKDLCGKSRLQVQPCRKGNRHISNKVMLIIKCSLPIVVAILIVLVIVFLKNKRNDDNNSTKRDLMNLDTPTRISYYELLRGTNGFDESNLVGSGSFGSVYKAVLPIEKIVAVKVFNLDMEQSSRSFDAECKTMCHLRHRNLIKIISSCSNDHFKSLIMEFMENGSLDKWLYSHNNYLDVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDKDMVAHLSDFGISKLFGEKQLEIYTNTLATIGYMAPEFGSKGVVSAKGDVYSYGILLMEMFTRKKPTDEMFVQGFSLKDWVSNSTPHSIMNIIDANLLHSENQNTENILPYMSSVFELALNCSIDLPEARLTMIDVVVSLKKIKALFIENA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1788 709 SMART serkin_6 426 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1788 709 Gene3D Phosphorylase Kinase; domain 1 387 501 - -
Alju04g1788 709 PANTHER OS04G0122200 PROTEIN 10 117 - -
Alju04g1788 709 SUPERFAMILY L domain-like 96 348 - -
Alju04g1788 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Alju04g1788 709 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Alju04g1788 709 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Alju04g1788 709 ProSiteProfiles Protein kinase domain profile. 426 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1788 709 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 68 360 - -
Alju04g1788 709 SMART LRR_typ_2 94 116 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 236 260 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 165 188 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 284 307 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 141 164 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 20 44 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 189 212 IPR003591 -
Alju04g1788 709 SMART LRR_typ_2 117 140 IPR003591 -
Alju04g1788 709 FunFam Serine-threonine protein kinase plant-type 406 501 - -
Alju04g1788 709 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Alju04g1788 709 SUPERFAMILY L domain-like 11 107 - -
Alju04g1788 709 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 502 709 - -
Alju04g1788 709 SUPERFAMILY Protein kinase-like (PK-like) 401 698 IPR011009 -
Alju04g1788 709 Gene3D Ribonuclease Inhibitor 3 358 IPR032675 -
Alju04g1788 709 Gene3D Transferase(Phosphotransferase) domain 1 502 706 - -
Alju04g1788 709 Pfam Protein kinase domain 428 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1788 Alju-ChrAlju04 45113134 45116230 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1788 4 707 Receptor kinase-like Gene Family AT3G47570 40.296 7.03e-153 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1788 Pkinase 5.2e-46 CL0016