Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1710 ATGTCAAACTGCATTATAGGGTGCTACTATTGCGTCTCTGATGAACCTGCTTTTCCTGAAGCCTTTGAAAACGTATCTACTCAATACCACAACACCATCATACCAAATTTCAACGTCAAGATCTGTGTTTATTTCATACAACGCTGTCCTTGTGGTTGTGGTTTTCCTTGTCTCATTAATAATATTCCCTCCCCACCACTTTCTTCTCACTGCATCTCTTGCAGTAAGTTCTTCAAAACTGCTTCGACCTTTCTTCGTCGTCATCTTTCCCACAATTTAATCCAACCTCAAGTTCTTGATTTATTGATACCCAAACTCATGAATAAAGCTCGACAGTTTTTCAACAAAATTATGGATAAAGATTCTTCTTCTTATCCTTCTGTTTTTGAAGACCGTTTAGTGGTGTTTCCTTTGTGTATTGATGTTTTTGTTGAATTGCTCAATGTTAATGAGAGGAGAAAGATTCCTGCGTCTGAAGAAGCCATTCAATCACTCAACAATATGAGACTCAAAGAAGATGATGATATTGATTTAAGTGAGAAGAATGAGTGTTGTATTTGTCTAGAAGATTTCCGTGACAACAGAGAGTTCTCGACCATGCCGTGTCAACATATTTTTCACTATAATTGTATTGTCACATGGCTAAATACTAGTCATTTGTGTCCCTTATGTCGATATCCAATGCCAGTTGATGATAATTCTTTAGAATGTTGCTAA 717 0.3668 MSNCIIGCYYCVSDEPAFPEAFENVSTQYHNTIIPNFNVKICVYFIQRCPCGCGFPCLINNIPSPPLSSHCISCSKFFKTASTFLRRHLSHNLIQPQVLDLLIPKLMNKARQFFNKIMDKDSSSYPSVFEDRLVVFPLCIDVFVELLNVNERRKIPASEEAIQSLNNMRLKEDDDIDLSEKNECCICLEDFRDNREFSTMPCQHIFHYNCIVTWLNTSHLCPLCRYPMPVDDNSLECC 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1710 238 ProSiteProfiles Zinc finger RING-type profile. 184 225 IPR001841 -
Alju04g1710 238 SMART ring_2 184 224 IPR001841 -
Alju04g1710 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 231 IPR013083 -
Alju04g1710 238 SUPERFAMILY RING/U-box 167 231 - -
Alju04g1710 238 Pfam Ring finger domain 182 225 IPR001841 -
Alju04g1710 238 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 112 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1710 Alju-ChrAlju04 42436711 42437427 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1710 146 235 C3H Transcription Factor Family AT1G26800 38.889 1.90e-14 68.2