Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1683 ATGGAGATTTCACCCATCAGAGGGTTACCTGATGATCATCAACTGGAAATGACAATGAAGGATCCAAGTTATGTTCATGATGAGTGGCACTTGAACGCATATGAGGATCCAACCTTAATACCACCCATAGCTTCTGGTTTTGGAGAGACCTTATTACAGCAACATTCTTTCTGTAATAATAATATGAACCAAAACTACTTCAATTCCAAAGTCATCAGTTGCACCCAAACATCATCACCTTCCATTAATGAAAGACCCACAAAGCAGATGAAAACTGGCAACACAGAGAGTGATCCAGACCTGACATTTGATTCGGGTCCTAACCATGTTTCCTTTGTGAACCAGAACTACATAATGGATCAGATGGGATTATTAATGGGGAAGATTACCAACAATAAGGATGAGATTGGGACCAATAACAATTTTGTTGGTGATCATCATGTTTTGGTGTCTCAAGAATCCTTGGGGAATCCAAACTATGGGTTCAACCCGACAAGCCAATTAGATCAGCTGGCCAGGAAGATTAATGGGACCATTACTAGTCCTGATAATAATAATAATAACAATAATAGAACCTCTCATCAACCAGTGCAGGATCACATCATTGCTGAAAGGAAACGAAGAGAGAAGCTTAGCCAGAGGTTCATTGCTCTCTCCGCCCTTGTTCCTGATCTTAAGAAGATGGACAAAGCTTCTGTACTTGGAGATGCTATAAAGTACATGAAGCAACTGCAAGAGAAAGTGAGGGTTCTTGAGGAGGAACAAACAAAGGCGAAAATAGTTGAATCTGTAGTGATTGTGAGGAAATCTCAGTTTCTTCCTTGTGATTCTTCAGACTCTAATAATTCTTCATATTCTTCTTCTGGTGGAGGTGGAGGATCATCATCATCCTTGCCAGAAATTGAAGCGAGGTTCTGTGAAAGAAGCGTGCTCATAAGAATTCACTGTGAGAAAATCAAAGGAATTGTGGAAAAAGCTATTGGTGTGATTGAGGATCTCCATTTAATAGTCACCAATAGTAATTCCATGACTTTTGGAAGTGCTGCTCTTGATATCACAATTATTGCTCAGATGGATTCAGAATTTTGCATGACACTGGAGGATCTTGTGGGAAACCTACGCTCAGCCTTTAAATCTTTCATGTGA 1146 0.3988 MEISPIRGLPDDHQLEMTMKDPSYVHDEWHLNAYEDPTLIPPIASGFGETLLQQHSFCNNNMNQNYFNSKVISCTQTSSPSINERPTKQMKTGNTESDPDLTFDSGPNHVSFVNQNYIMDQMGLLMGKITNNKDEIGTNNNFVGDHHVLVSQESLGNPNYGFNPTSQLDQLARKINGTITSPDNNNNNNNRTSHQPVQDHIIAERKRREKLSQRFIALSALVPDLKKMDKASVLGDAIKYMKQLQEKVRVLEEEQTKAKIVESVVIVRKSQFLPCDSSDSNNSSYSSSGGGGGSSSSLPEIEARFCERSVLIRIHCEKIKGIVEKAIGVIEDLHLIVTNSNSMTFGSAALDITIIAQMDSEFCMTLEDLVGNLRSAFKSFM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1683 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Alju04g1683 381 MobiDBLite consensus disorder prediction 276 297 - -
Alju04g1683 381 Pfam Helix-loop-helix DNA-binding domain 199 245 IPR011598 GO:0046983
Alju04g1683 381 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 257 IPR036638 GO:0046983
Alju04g1683 381 MobiDBLite consensus disorder prediction 276 295 - -
Alju04g1683 381 MobiDBLite consensus disorder prediction 77 107 - -
Alju04g1683 381 CDD bHLH_AtNAI1_like 198 270 - -
Alju04g1683 381 Coils Coil 234 261 - -
Alju04g1683 381 SMART finulus 201 250 IPR011598 GO:0046983
Alju04g1683 381 PANTHER BHLH TRANSCRIPTION FACTOR 53 378 - -
Alju04g1683 381 Gene3D - 192 264 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1683 Alju-ChrAlju04 41897359 41900872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1683 164 381 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 53.211 4.90e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g1683 HLH 7.4e-11 No_clan