Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1679 ATGTTCGCCGGAGATATTTCCCGGCGATGTTCCTCGCCGGTGATTTTGTTTTCTCTGTTTTTTCTCTTCCTGGCTGGTTCGTCCCTGGCCGATGAGTTTCAAATGCTCATGAAGTTCAAGTCCTCTGTTCAAACTTCAAATGCCGATGATGTTTTCGGTTCATGGACGGAAGTCAATTCTCCCTGCAATTTCAACGGAATTCTCTGCAATTCCAATGGTTTCGTTTCAGAAATCAATCTCGCCGGAAGAAATCTTGGGGGTACTGTTCGGTTTGATTCACTTTGCACGCTTCCGTCGTTGGAGAAATTATCTCTGGGGTCTAATGCCTTTCATGGAAGCATCAGTGAGGACCTGAGGAAGTGCAGTAATTTGAAGTATTTGGATTTGGGCGGGAATTCGTTTTCTGGGGAAATGCCTGAGTTCTCTAATTTGATCAAGCTTACCTACTTGAACTTGAATGCCAGCGGAATTTCTGGGACATTTCCATGGAAATCATTGGGAAATCTAACTAGTCTTGGATTTGTAAGCCTTGGAGATAACATTTTTGAAAAAAGTCCTTTTCCTTTGGAGGTGTTAAAGCTTGAGAAATTGTATTGGCTTTACCTCACAAATTGCAGCATCACTGGCAAAATTCCATTGGGTATTGGGAATCTAACTCAGCTTGAGGATCTTGAGCTTTCTGATAACCTTTTGACAGGTGAAATCCCAGGTGATATTGGGAAGCTTCAGAAGCTGAGGCAACTTGAGATATATGATAACTACTTGATTGGGAAAATCCCAAAAGGATTTGGTAATCTCACAAATCTTGTCTACTTGGATGTTTCTAATAACCAGCTTGAAGGTGATATTTCTGAGCTACGGTTCTTGACAAACTTAGCTTCTCTTCAGCTTTTTCAGAACCAATTCTCTGAAGGAATTCCAAATGAGTTCGGAGATTTCAAAAGACTCATTGAACTTTCACTTTATGCAAATAATTTCACTGGTCCTCTCCCTCAAAAGCTTGGCTTCTGGGTTGGCTTACAATATATTGATGTTTCGGATAACTCTCTTTCTGGTCCTATACCACCTGACATGTGCAGGAACAACAACATGACTGATCTAGCTTTGTTGAACAATAGCTTCACTGGAAGTATACCTGAAACATATGCGAATTGTTCGGCTATGGTTCGTTTTCTCGTTAACAGAAACTTGCTTTCTGGTCGTGTTCCTTCGGGTTTATGGGGCCTGCCTAATATGGAAATAATTGATCTTTCAATGAATCAGTTTGAAGGTCCAGTGGCATCTGATATTGCTGACGCAAAATCTCTTGCACAACTATTTTTAACTGACAACAAGTTCTCTGGTGAACTACCCTCAGGAATCTCAGAAGCTTCTTCATTGGTATCAATCAAGTTGGGCTCAAATCAATTCTCTGGTAAGCTTCCAGATTCTATAGGAAACTTGAAGAAATTGGGTAGTCTTAAGTTGGATGGAAACAATTTTTCTGGTTCTATACCAGAGTCTTTAAGTTCTTGTATTTCTCTCAGTGAAGTAAACATTGCTGGTAACTCGCTTTCTGGGGAGATCCCAACGAGTCTTGGCTCTCTGCCTACTCTCAATTCATTAAACCTATCGTCCAATAGACTTTCGGGCGAAATTCCATCGAGCTTGTCGTCTCTTAAACTGAGCCTTCTTGATTTATCAAACAACAATTTATTTGGTCCAGTGCCAGGTTCACTCTCTATTCCGGCATTCATAGATGGGTTAAAGGGAAATCCTGGCTTATGCAGTGAGACTTTGGAAAATTTTAGGCCATGTTCACTGGGTAGCACTGGCTCTAGTCGAGTTAGGACCATTATTCTCTGTTTGCTTGCTGGTATAATGGTTCTGCTAGTTTCATTGGCATGCATATTCTTCCTGAAACTAAAGCAGAACAAGTTAGAGGAGAAGCCTTTGAAGACTAATTCCTGGAATTTGAAGCAGTACCATGCGATAAACTTCAACGAAAACGAAATCATTGAAGGGATCAAGTCTGAGAATCTGATTGGCAAAGGAGGATCCGGGAATGTTTACAAGGTTGTTCTCAAATGCGGCAAAGAATTGGCAGTCAAGCACATATGGACTTCGAATCTGGGTGAACCAAGAAGTGGCCGGAGCAGTTCAGCGATGCTGAAAAGAAGTTGCCGGTCGCCGGAGTATGATGCTGAGGTGGCCACACTAAGCTCCATAAGGCATGTGAATGTAGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGTAGCCTTCTTGTTTACGAGATTTTGCCGAACGGGAGTTTGTGGGATAAGCTGCACAATTGCCAGAAAAGTCCTATGAGTTGGGAGGTTAGGTATGAGATTGCTTTGGGAGCAGCTAGAGGATTGGAGTATCTGCATCATGGGTGTGATAGGCCAGTTATACATAGAGATGTGAAATCAAGTAACATCTTGATTGATAAAGAATGGAAGCCAAGGATTGCTGACTTTGGGCTTGCCAAGATTGTGCAGAGAGGGGCTGGCAATTGGACAAATGTTATTGCTGGAACACTTGGTTACATGGCTCCTGAGTATGCCTATACATGTAAGGTTACTGAGAAGAGTGATGTGTATAGCTTTGGAGTGGTTCTATTGGAGTTAGTGACTGGGAAGAAGCCAAATGAATCAGAATTTGGGGAGAGCAAGGACATAGTCAACTGGGTATGCGGCAACAAGAGGACCACCAAAGAAGACATGGTTGAGCTTGTGGATTCCACAATTCCAAAGCATTACAAAGATGATGCCATGAAGGTTCTGAGAATTGCAACACTCTGCACTGTGAAGGTTCCATACTCAAGACCTTCCATGAGAATGGTGGTTCAAATGCTGGAAGAGGCAGCACCTTGTACTCTGACCCATGTTGTTGTGGCTAAAGATGGTTAA 2916 0.4225 MFAGDISRRCSSPVILFSLFFLFLAGSSLADEFQMLMKFKSSVQTSNADDVFGSWTEVNSPCNFNGILCNSNGFVSEINLAGRNLGGTVRFDSLCTLPSLEKLSLGSNAFHGSISEDLRKCSNLKYLDLGGNSFSGEMPEFSNLIKLTYLNLNASGISGTFPWKSLGNLTSLGFVSLGDNIFEKSPFPLEVLKLEKLYWLYLTNCSITGKIPLGIGNLTQLEDLELSDNLLTGEIPGDIGKLQKLRQLEIYDNYLIGKIPKGFGNLTNLVYLDVSNNQLEGDISELRFLTNLASLQLFQNQFSEGIPNEFGDFKRLIELSLYANNFTGPLPQKLGFWVGLQYIDVSDNSLSGPIPPDMCRNNNMTDLALLNNSFTGSIPETYANCSAMVRFLVNRNLLSGRVPSGLWGLPNMEIIDLSMNQFEGPVASDIADAKSLAQLFLTDNKFSGELPSGISEASSLVSIKLGSNQFSGKLPDSIGNLKKLGSLKLDGNNFSGSIPESLSSCISLSEVNIAGNSLSGEIPTSLGSLPTLNSLNLSSNRLSGEIPSSLSSLKLSLLDLSNNNLFGPVPGSLSIPAFIDGLKGNPGLCSETLENFRPCSLGSTGSSRVRTIILCLLAGIMVLLVSLACIFFLKLKQNKLEEKPLKTNSWNLKQYHAINFNENEIIEGIKSENLIGKGGSGNVYKVVLKCGKELAVKHIWTSNLGEPRSGRSSSAMLKRSCRSPEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEILPNGSLWDKLHNCQKSPMSWEVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILIDKEWKPRIADFGLAKIVQRGAGNWTNVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLLELVTGKKPNESEFGESKDIVNWVCGNKRTTKEDMVELVDSTIPKHYKDDAMKVLRIATLCTVKVPYSRPSMRMVVQMLEEAAPCTLTHVVVAKDG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1679 971 FunFam Receptor-like protein kinase 7 114 363 - -
Alju04g1679 971 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Alju04g1679 971 ProSiteProfiles Protein kinase domain profile. 669 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1679 971 Gene3D Ribonuclease Inhibitor 287 604 IPR032675 -
Alju04g1679 971 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 476 597 - -
Alju04g1679 971 SUPERFAMILY L domain-like 305 665 - -
Alju04g1679 971 SMART LRR_typ_2 266 286 IPR003591 -
Alju04g1679 971 SMART LRR_typ_2 529 553 IPR003591 -
Alju04g1679 971 SMART LRR_typ_2 97 121 IPR003591 -
Alju04g1679 971 SMART LRR_typ_2 218 242 IPR003591 -
Alju04g1679 971 SMART LRR_typ_2 289 312 IPR003591 -
Alju04g1679 971 SMART LRR_typ_2 481 505 IPR003591 -
Alju04g1679 971 Gene3D Transferase(Phosphotransferase) domain 1 761 964 - -
Alju04g1679 971 FunFam Receptor-like protein kinase HAIKU2 652 760 - -
Alju04g1679 971 SUPERFAMILY L domain-like 62 375 - -
Alju04g1679 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Alju04g1679 971 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Alju04g1679 971 SUPERFAMILY Protein kinase-like (PK-like) 663 955 IPR011009 -
Alju04g1679 971 FunFam Inactive leucine-rich repeat receptor-like protein kinase 379 475 - -
Alju04g1679 971 Pfam Protein kinase domain 671 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1679 971 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 23 954 - -
Alju04g1679 971 SMART serkin_6 669 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1679 971 Gene3D Ribonuclease Inhibitor 187 286 IPR032675 -
Alju04g1679 971 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Alju04g1679 971 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 761 969 - -
Alju04g1679 971 Gene3D Phosphorylase Kinase; domain 1 652 760 - -
Alju04g1679 971 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1679 Alju-ChrAlju04 41775453 41778868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1679 17 970 Receptor kinase-like Gene Family AT1G09970 58.489 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju04g1679 Pkinase 2e-44 CL0016