Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1648 ATGTTCTGGCAAAGCTTTGATCATCCCACCGATACCTTACTTCCATATGCCAAACTGGGCTTCAATAAAAGAACTGGTCAAAACTGGTTCTTTCAGTCATGGAGAACAGATGATGATCCTGCAACAGGAAGCTTATCTACTAGGTTCAATTCTTCTGGCAAAGCTCAGTTGTTTCTGTACAAACAAAATGTTCCAGTGTGGCGAGTTGGATCCTTCAATGGAGAAATATTGGTCGGCCTGCCAGCTTTGAAACGATCTATGTTGAATACTTTCAATGTCTCTTTTACAGAAGATGATAATGAGGTTAGTGTCATGTTTCATGCCTTGGATAACACCTCCATATTCAAGATTGTAACTATTCCATCGAGAGCCATACAAATACATAAATGGGATTACAATAAGAAAGATTGGAAGCAATATGGGTCTTTTCCTGAAGTGGACTGTGACTTGTATGGATCTTGCGGACCCGATAGTAATTGTGACTCTTACAATGATCGATACAAAAAGTGTACTTGCCTACCGGGGTTTGAACCCAGAAACCCTAACGATTGGTATGAGAAGGATGATCAATCAGCAGGTTGTGTGAGGAAGAAAGGACCACCCTTGTGCAGAAATGGAGAAGGCTTCATTAAACTAGAAAGTGTCAAGATTCCTGATACATCTATAGCAAATGTTAGAAAGGGTTTGAGCATGGAGAAATGTGAACAAGAGTGCTTGAGAAACTGCTCTTGTACTGCCTATGCTGCTGCAGATGTGAGAAATGGAGGAAGTGGGTGCTTAGCATGGCATGGGACTCTAACGGACACAATAGTATTAAATGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCATTGAACTAGCAAATTATAACAGGAAATCGAAAGGAACACTTTCTGTGTCTGGAATGGTGGGAATTCTGATGGCTGTCGTTGTGATTATTCTTCTGATTGCGATGTGTGTTTATTGCTTTTGGATGAAGAAAAAGAGAGACAAAATGGCTGAGCAACGAATAAACATGGAATCTCCCTCAGAAGAAGGGCATGGTGAAAATAGAACCCAAGTAAGCTTACCATTTTTCAACATTAAAACTATACAGGTTGCTACAAATAGTTTTTCAAGTGAGAATGAGTTAGGGCATGGTGGATTTGGCTCCGTCTATAAGGGCTTATTAGCTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTAAAGGTTCAGGACAAGGGACTGAAGAGTTCAAGAATGAAATTAAACTGATTGCTAAATTGCAGCACAGGAATCTTGTAAGGTTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGGTCTATGAGTACCTTCCCAACAAAAGCTTGGACTTCTATCTTTTTGATATGAATCAAAGATCTTCTTTAGATTGGGATAAGCGTGTTCATATCATCTTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCATGATTCAAGGTTAAAAGTAATCCACCGAGACCTTAAAGCTAGCAATGTTCTCTTAGATGCTACAATGAACCCCAAAATTTCAGATTTTGGTATGGCTAGAATATTTGGAGAGGACCAAATCCAAGCAAGAACAAGGAGGATTGTTGGGACATAGAGAAATACAGATCATGAAAAGGAAGGATCACACTTGAATTTGATTGGACAAGTATGGGACTTGTGGGTAGAAGGAAAGGCCTTGGAAATAGTAGACTCAACACTTGGTGAATCATATCCTGCTGATGTTGTCCTAAGATACGTCAAAACAGGGCTCTTGTGTGTGCAAGAAATTGCCGTCCAAAGACCATCCATGTGTGAAGTTATATTCATGCTTGGCAATGATGTAAGCCTTCCCTCGCCTCAAAAACCTGCATTTCTGTTGAATTCTAATGATTTGTATTCAGAGACTTCAACCTCTAGGGAAGCTTCAGCCAATGTCCGCACTCATAGGGAAGCTTCAGCTAATGTCCTCACTCATTCTACAATTTGTGGTCGATAA 1998 0.3994 MFWQSFDHPTDTLLPYAKLGFNKRTGQNWFFQSWRTDDDPATGSLSTRFNSSGKAQLFLYKQNVPVWRVGSFNGEILVGLPALKRSMLNTFNVSFTEDDNEVSVMFHALDNTSIFKIVTIPSRAIQIHKWDYNKKDWKQYGSFPEVDCDLYGSCGPDSNCDSYNDRYKKCTCLPGFEPRNPNDWYEKDDQSAGCVRKKGPPLCRNGEGFIKLESVKIPDTSIANVRKGLSMEKCEQECLRNCSCTAYAAADVRNGGSGCLAWHGTLTDTIVLNDEGHDLYVRVDAIELANYNRKSKGTLSVSGMVGILMAVVVIILLIAMCVYCFWMKKKRDKMAEQRINMESPSEEGHGENRTQVSLPFFNIKTIQVATNSFSSENELGHGGFGSVYKGLLANGQEIAVKRLSKGSGQGTEEFKNEIKLIAKLQHRNLVRLLGYCIHKEERMLVYEYLPNKSLDFYLFDMNQRSSLDWDKRVHIIFGIARGLLYLHHDSRLKVIHRDLKASNVLLDATMNPKISDFGMARIFGEDQIQARTRRIVGTXRNTDHEKEGSHLNLIGQVWDLWVEGKALEIVDSTLGESYPADVVLRYVKTGLLCVQEIAVQRPSMCEVIFMLGNDVSLPSPQKPAFLLNSNDLYSETSTSREASANVRTHREASANVLTHSTICGR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1648 665 ProSiteProfiles Protein kinase domain profile. 373 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1648 665 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Alju04g1648 665 Gene3D Transferase(Phosphotransferase) domain 1 543 625 - -
Alju04g1648 665 CDD PAN_AP_plant 204 283 - -
Alju04g1648 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Alju04g1648 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 546 637 - -
Alju04g1648 665 Pfam D-mannose binding lectin 2 35 IPR001480 -
Alju04g1648 665 Pfam S-locus glycoprotein domain 67 179 IPR000858 GO:0048544
Alju04g1648 665 Gene3D Phosphorylase Kinase; domain 1 333 448 - -
Alju04g1648 665 SUPERFAMILY Protein kinase-like (PK-like) 357 639 IPR011009 -
Alju04g1648 665 SMART serkin_6 373 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1648 665 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 449 540 - -
Alju04g1648 665 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 338 448 - -
Alju04g1648 665 Pfam PAN-like domain 203 268 IPR003609 -
Alju04g1648 665 Gene3D Transferase(Phosphotransferase) domain 1 449 542 - -
Alju04g1648 665 SMART ntp_6 204 283 IPR003609 -
Alju04g1648 665 ProSiteProfiles PAN/Apple domain profile. 203 284 IPR003609 -
Alju04g1648 665 Pfam Protein tyrosine and serine/threonine kinase 376 527 IPR001245 GO:0004672|GO:0006468
Alju04g1648 665 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 40 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1648 Alju-ChrAlju04 40136576 40141012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1648 292 629 Receptor kinase-like Gene Family AT4G05200 45.722 2.70e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1648 PK_Tyr_Ser-Thr 1.4e-34 CL0016