Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1639 ATGATTATTCACAAATGCTTCTTACTCTTCTTCTTCCTTACCATTAGCTTCCTCTGTTCTGCCACCATTGAAGCACGTCCCACTTATCTTTACCACAACTGCTCCACCGCCGGCAAAACCTTCTCAGCTAATAATACCTTCCGATTCCACCGGACCACCCTCCTTTCCTCCTTAGCTTCCGCCAATGGCAGCTTCCAGAACACCACCGTTCCAGGAGGCGGAAGCGATACCATCTACGGCCTCTACATGTGCCGTGGTGACGTCTCCCTCCAGGTGTGCAATCAATGCGTCGTTAACGCAACCCAACGGCTACCTTCTGAGTGCCCATTTTCGAAGGAGGCCGTAATCTGGTACGACGAGTGCATGCTTCGCTATTCCAACATCTCTTTCTTCTCCACCATTGATAAATGGCCAACCATCGTCATATTGAACCCGAACAATATCTCCGACTCGTACCAGGCAATGTTCAAGAGCTTTTTGCTTACTTTTATGAATGAGACGGCAGGTAAGGTGGCAGCGAAACCTTTGTCGGAGAAGGGGAAGACATATGCGAAGAACCAAGCGATTTTTCAGTCTCAAACTGTGTATAGTCTAGCTCAATGCACACCGGACCTGCCGCTTCAAGATTGCACAAGTTGTCTGAGTGGTGTGATTCGGAACATTCCATTGTGTAGGGAGGGGAAGATCGGAGGAAGAGCTGTGAATCCTAGTTGCAACATTCGCTATGAGTTGTTTTCATTCTTTGATACCAATCAGCTAAATGCGCCGGCACCAGCCCCGGCTCCGGCTCCGGCTCCGGTACTTACACGGGTTCCATATTTCCCTGGAGCCAATTCTTTGCATCATCCTCCATCTCGACCTCCAGCAAGGACAATTGTGATAGTTGTGGCTTCTCTTGTTGCTGGAGGGATAATTTTTTATTTAGCTTACTTTCTCTTCAAGATTCGAATGAAGAAGAGTCATAGGGCTATTCTACGACAACAATATTTTGGAAGGGAAAGCACAACTTTAGAGCATCTGCAATTTAGTCTAGCTACAATTAAGGCTGCGACAAATAAGTTTTCTCATGAAAATAGATTAGGGAGAGGCGGATTTGGACAAGTTTTCAAGGGTGTTCTTCCTAATGGGCAAGACATAGCTGTGAAGAGACTTTCGAAAGGTTCTGGCCAAGGTGCGGCAGAGTTTAAGAACGAGGTTTTATTGATAGCTAGACTCCAGCACAGAAATTTGGTGGCGTTATTAGGATTCTGCATTGAAGAGCAAGAGAAACTACTTGTTTATGAATATGTTCCAAACAGAAGCCTTGATTACTTTTTATTTGATTTTGGCCTAGCCAAGATGGTTGCTATAAGTGAGCATGAGGGAAGTACAAATCGAATTGTTGGAACATATGGTTATATATCTCCAGAATATGCGATGTTTGGACAATATTCTGAAAAGTCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAGGAATACAGGTTGTCATGATTCACAATACGCAGATGGCCTCTTAAGCTATACATGGAAAAACTGGAGGGATGACAAGTTGGTAGAGATATTGGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATCAAGTGCATCCAAATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGCAAGGCCTTCCATGGCTACGGTTGTTTCATATCTTAGCAATGATTCTATTCAATTGCCATTACCACAGGAACCTGCTTTCTTTTTGCATGGTCGACCAGAGCCTATTACCACTAATGGAAGTGGAGAATCATGCTCTATTAATGAAGCTTCTATGAGTGAATTCTTTCCTCGCTAA 1848 0.4329 MIIHKCFLLFFFLTISFLCSATIEARPTYLYHNCSTAGKTFSANNTFRFHRTTLLSSLASANGSFQNTTVPGGGSDTIYGLYMCRGDVSLQVCNQCVVNATQRLPSECPFSKEAVIWYDECMLRYSNISFFSTIDKWPTIVILNPNNISDSYQAMFKSFLLTFMNETAGKVAAKPLSEKGKTYAKNQAIFQSQTVYSLAQCTPDLPLQDCTSCLSGVIRNIPLCREGKIGGRAVNPSCNIRYELFSFFDTNQLNAPAPAPAPAPAPVLTRVPYFPGANSLHHPPSRPPARTIVIVVASLVAGGIIFYLAYFLFKIRMKKSHRAILRQQYFGRESTTLEHLQFSLATIKAATNKFSHENRLGRGGFGQVFKGVLPNGQDIAVKRLSKGSGQGAAEFKNEVLLIARLQHRNLVALLGFCIEEQEKLLVYEYVPNRSLDYFLFDFGLAKMVAISEHEGSTNRIVGTYGYISPEYAMFGQYSEKSDVFSFGVIVLEIISGKRNTGCHDSQYADGLLSYTWKNWRDDKLVEILDSNINELGSYNEVIKCIQIGLLCVQENPNARPSMATVVSYLSNDSIQLPLPQEPAFFLHGRPEPITTNGSGESCSINEASMSEFFPR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1639 615 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Alju04g1639 615 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
Alju04g1639 615 FunFam Cysteine-rich receptor-like protein kinase 25 138 247 - -
Alju04g1639 615 SUPERFAMILY Protein kinase-like (PK-like) 337 598 IPR011009 -
Alju04g1639 615 Gene3D - 26 130 IPR038408 -
Alju04g1639 615 Gene3D - 139 247 IPR038408 -
Alju04g1639 615 FunFam Cysteine-rich receptor-like protein kinase 10 316 429 - -
Alju04g1639 615 ProSiteProfiles Gnk2-homologous domain profile. 136 247 IPR002902 -
Alju04g1639 615 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Alju04g1639 615 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Alju04g1639 615 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 441 - -
Alju04g1639 615 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 449 574 - -
Alju04g1639 615 Pfam Protein tyrosine and serine/threonine kinase 441 569 IPR001245 GO:0004672|GO:0006468
Alju04g1639 615 Pfam Protein tyrosine and serine/threonine kinase 357 439 IPR001245 GO:0004672|GO:0006468
Alju04g1639 615 ProSiteProfiles Protein kinase domain profile. 354 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1639 615 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Alju04g1639 615 Gene3D Transferase(Phosphotransferase) domain 1 426 576 - -
Alju04g1639 615 Gene3D Phosphorylase Kinase; domain 1 315 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1639 Alju-ChrAlju04 39598506 39602977 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1639 7 615 Receptor kinase-like Gene Family AT3G45860 37.936 1.87e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1639 PK_Tyr_Ser-Thr 1.5e-11 CL0016