Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1635 ATGTGCTTGAAGAGAAATATCTCGTTGACCCGGTCGCATCCATTTTTCCATCGGCCTGCAGCAAGGATAAGTGCGATAGTTGTGGCTTCTCTTGTTGTTGGCGGGATAATATTTTATTTCGCTTACTATCTCCTAAAGATTAGAGTGGAAAAACGTCATAGGGCTAATCTCAGACAAAAATACTTTGGAAGGGAAAGCACAACTTTGGGGCATCTGCAATTTAGTCTAGCTACAATCGAGGCCGCGACAAATAAGTTTTCTAATGAAAATAAATTAGGGAGAGGTGGATTTGGACAAGTATTCAAGGGTATCCTTTCAAATGGCCAAGAAATAGCTGTGAAGAGGCTTTCAAAAAGTTCTGGCCAAGGTGCAGAAGAGTTTAAGAACGAGGTTTTATTGATAGCTAGACTCCAGCACAGAAATTTGGTGGCATTATTAGGATTCTGCATTGAAGAGCAAGAGAAACTACTTGTTTATGAATATGTTCCTAACAGAAGCCTTGATTACTTCTTATTTGGTTCTCAAAATAGCAGAGTATTAGATTGGATGGAGCGTAGTAAAATCATAGGAAGAATTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGCCTAAAAATCATACATCGAGATCTCAAACCTAGCAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAAAATGGTTGCTGTCAATGAAAATGAAGGAAGTACAAATCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTAGAAAGAAGAATACAGGATGTCATAATTCCCAATATGCTGATGGCCTCTTAAGCTATACATGGAAAAACTGGAGGGATGACAAGTTGGTAGAGATATTGGATTCAAATATAAATGAATTGGGATCTTACAATGAAGTGATCAAGTGCATCCAAATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGCAAGGCCTTCCATGGCTACGGTTGTTTCATATCTTAGCAATGATTCTATTCAATTGCCTTTACCCCAGGAACCTGCTTTCTTTTTGCATGTTCATCAACCACAGCCTATTATCTCCAATAATGAAAGTGGAGAGTCATGCTCCGTTAATGAAGCTTCTACGAGTGAATTCTTTCCTCGCTAG 1218 0.3711 MCLKRNISLTRSHPFFHRPAARISAIVVASLVVGGIIFYFAYYLLKIRVEKRHRANLRQKYFGRESTTLGHLQFSLATIEAATNKFSNENKLGRGGFGQVFKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKLLVYEYVPNRSLDYFLFGSQNSRVLDWMERSKIIGRIARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAVNENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISRKKNTGCHNSQYADGLLSYTWKNWRDDKLVEILDSNINELGSYNEVIKCIQIGLLCVQENPNARPSMATVVSYLSNDSIQLPLPQEPAFFLHVHQPQPIISNNESGESCSVNEASTSEFFPR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1635 405 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 388 - -
Alju04g1635 405 CDD STKc_IRAK 92 357 - -
Alju04g1635 405 MobiDBLite consensus disorder prediction 384 405 - -
Alju04g1635 405 ProSiteProfiles Protein kinase domain profile. 86 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1635 405 Pfam Protein kinase domain 87 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1635 405 Gene3D Transferase(Phosphotransferase) domain 1 162 364 - -
Alju04g1635 405 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Alju04g1635 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Alju04g1635 405 FunFam cysteine-rich receptor-like protein kinase 10 162 364 - -
Alju04g1635 405 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Alju04g1635 405 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 48 161 - -
Alju04g1635 405 SUPERFAMILY Protein kinase-like (PK-like) 69 382 IPR011009 -
Alju04g1635 405 SMART serkin_6 86 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1635 Alju-ChrAlju04 39511766 39516606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1635 36 405 Receptor kinase-like Gene Family AT3G45860 52.368 9.54e-135 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1635 Pkinase 8.2e-49 CL0016