Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1613 ATGAAAGATTTATTTGACGCCTTTATAACTATTTTATGTGTTGAAGATTTAGGCGAAAATCAGGAGCCGTTAAACTGGGTTGCAAGATTTCAGATAGCACTAGATGTTGCAAGGGGACTGGAATATCTACATTATGGGGCTTCTCCCCCTGTTGTTCACCGCGACATTAAATCTTCCAACATACTGCTGGACCAGTTTATGAGAGCCAAGGTAACTGACTTTGGGCTTTCTAGACCAGAGATGATTAAACGTCGTTCATCTCATGTCAAAGGAACTTTTGGCTATCTTGATCCTGAATACATGTCTACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGCGTGCTGCTCTTTGAATTGATTACTGGCAGGAATCCGCAGCAGGGCCTGATGGAATATGTGAAACTAGTAAGTGCTAATGCTATGTTGGATGCAGCCATGGAAGCCGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAGCTTAATGGAAAATATGAGGTGCGTAGGCTTAATGATATGGCTGCTCTCGCTTTGAAATGTGTCAATGAAGCATCCAGAGATCGACCTTCCATGAAGGACATTGTTGGATCATTATCTCAGCTCTGTAAGAAGAAGCATTGTTGTGAAAATGATAATATAAAGTCTCCTTCTGCAGTAAATGAAATTTCCGTTGAATTGGGTTAA 696 0.4023 MKDLFDAFITILCVEDLGENQEPLNWVARFQIALDVARGLEYLHYGASPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMIKRRSSHVKGTFGYLDPEYMSTKTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLVSANAMLDAAMEAESKVGWEEIVDSQLNGKYEVRRLNDMAALALKCVNEASRDRPSMKDIVGSLSQLCKKKHCCENDNIKSPSAVNEISVELG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1613 231 Gene3D Transferase(Phosphotransferase) domain 1 14 227 - -
Alju04g1613 231 Pfam Protein kinase domain 31 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1613 231 FunFam calcium/calmodulin-regulated receptor-like kinase 1 11 224 - -
Alju04g1613 231 SMART serkin_6 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1613 231 SUPERFAMILY Protein kinase-like (PK-like) 19 202 IPR011009 -
Alju04g1613 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Alju04g1613 231 PANTHER OS01G0750732 PROTEIN 13 220 - -
Alju04g1613 231 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1613 Alju-ChrAlju04 38957192 38958539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1613 24 204 Receptor kinase-like Gene Family AT5G48740 47.027 2.76e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Alju04g1613 Pkinase 1.2e-28 CL0016